Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g0775 ATGACAGGGCTTGGCTCTTCTTGTGGAGCATGTAAGTTCCTAAGGAGAAAGTGCACTAGTGGTTGTGTATTTGCTCCTTACTTCTCCTATGACCAGGCTGCAACACATTTTTCTGCAGTGCATAAGGTTTATGGTGCTAGTAATGTCTCAAGGCTATTGTCACATCTTCCAATCCAGAATAGGAGTGATGCAGCTATCACCATAACTTATGAAGCACTGGCTCGCATGCAGGATCCTATATATGGTTGTGTTGCTCATATTTATGCATTGCAGCAACAGGTTGCTAGCTTGCAAGAGGAGATAGATACTCTTGGAAGTCTAATGTCAAATTCCACCACCACATCTGGTCCTGTCAATTGTGGCAGTGTCCAAGCACCAATGGACTCAAACAACGGAATACAATACCCTTTGCAGGATGATGCTGTTACTAGGACACAATATTATCAAAATCAATTGGCTAATCTTCTTTCTCAAGAAGGAAATGCTGTGATCCACCAAAGTTTGGATTCGCAGATGGATATAGAGGTTCCTAATGCACTTGGACTTGAAGAGCCTTTATTATTTGATGATTCCAACACCAACCCACTAGACAAGTTCCTATCTGGAATTGACCAAGAGGGCTTCCTGAATCACCCTTGGTTCAAGCATAATGCAGAATAA 660 0.4227 MTGLGSSCGACKFLRRKCTSGCVFAPYFSYDQAATHFSAVHKVYGASNVSRLLSHLPIQNRSDAAITITYEALARMQDPIYGCVAHIYALQQQVASLQEEIDTLGSLMSNSTTTSGPVNCGSVQAPMDSNNGIQYPLQDDAVTRTQYYQNQLANLLSQEGNAVIHQSLDSQMDIEVPNALGLEEPLLFDDSNTNPLDKFLSGIDQEGFLNHPWFKHNAE* 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g0775 219 ProSiteProfiles LOB domain profile. 6 108 IPR004883 -
Dod08g0775 219 PANTHER LOB DOMAIN-CONTAINING PROTEIN 33 1 218 - -
Dod08g0775 219 PANTHER LOB DOMAIN CONTAINING PROTEIN 1 218 - -
Dod08g0775 219 Pfam Lateral organ boundaries (LOB) domain 7 103 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g0775 Dod-Chr8 9238481 9239575 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g0775 1 110 AS2 family AT5G06080 70.909 1.43e-55 173
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Dod08g0775 LOB 1.6e-35 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g0775 K13945 - gmx:100787638 293.123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g0775 08 9238481 9239575 Dod08g0775 08 9238481 9239575 ECH