Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g0774 ATGGCGAATCCTTGGTGGGCTGGGAATGTAGCTATGAGACCCACAGACCCAAACTCATCATCTCCATCACTAGAGCTGATGAGGAACAACACAGAAGATCACAACCTCAACCGACAAGGTCTTAGGAAAGAACAAGAATTCATGGACAACAACAACAACACTCCAACAAACAGCAGCAACAGCAACAGCAACACCAACGCCGAAGACGACGGCGCCGAAGAACACAACAACAACAACGCGGCGGACCACGGCGGGGGGAGCGGCGGTCGTCGCCCCCGAGGCAGGCCGCCGGGGTCCAAGAACAAGCCGAAACCGCCGGTGGTGATAACAAAGGAGAGCCCAAACGCGCTTCAAAGCCACGTCCTCGAGATCAGCGGCGGAAGCGACGTGGCTGAGTGCCTCTCCTCCTTCGCGAGCCGCCGCCACCGCGGCGTCTCAGTGCTGAGCGGCAGCGGCTCCGTGACCAACGTCACGCTCCGGCAGCCTGCCGCTCCCGGCGGGGTCGTCACTCTCCACGGCAGATTCGAGATCCTGTCGCTCTCCGGAGCTTTCCTTCCGGCGCCGTCGCCGCCGGAGGCCACCCGACTGACTGTGTACCTCGACGGAGGGCAGGGGCAGGTCGTCGGAGGCATCGTGGAGGGATCATTGGTGGCTTCGGGGCCGGTAATGGTGGTTGCTGCGACGTTTGCAAATGCTACGTATGAGAGGTTGCCGTTGGAGGAAGAAGAGCAAGACGAGGAAGAAGATGATGAGATGCAGGTGCAGGTGCAGGAATCTGGTGTGAACGAGGGTTGTGCGGGTCCCCCTGTGTCTCAGTCTCAGGGTTCAGAGTGCCTGGTGCGTATGACAAGGAATAGTGTAGTAAGTGAGTGGCAAATTAAGGTGAAGGCAGGTGGAGTTAAAGTTTCAATGTTACTAAAAGGAGAATTTTCAGGTGCTCCCAATAAATTAAAGTCTATCATACATCTTCCTCAGCCACCTGCCCTCCCAACGAAGCCATTTGCAACGCCACTGACATCCTCTTCGACTCAAGCTTTGTGTCCATGGCGCTCACACTTTAACTTGCTACAAAATCCTAGCTGGAGCAGTCCCCTTCCACCACCATCTTCGCCCCCTCCGTCAAGAAGTCTAGCCAGCCTCATCCTAGGGCATTGA 1155 0.568 MANPWWAGNVAMRPTDPNSSSPSLELMRNNTEDHNLNRQGLRKEQEFMDNNNNTPTNSSNSNSNTNAEDDGAEEHNNNNAADHGGGSGGRRPRGRPPGSKNKPKPPVVITKESPNALQSHVLEISGGSDVAECLSSFASRRHRGVSVLSGSGSVTNVTLRQPAAPGGVVTLHGRFEILSLSGAFLPAPSPPEATRLTVYLDGGQGQVVGGIVEGSLVASGPVMVVAATFANATYERLPLEEEEQDEEEDDEMQVQVQESGVNEGCAGPPVSQSQGSECLVRMTRNSVVSEWQIKVKAGGVKVSMLLKGEFSGAPNKLKSIIHLPQPPALPTKPFATPLTSSSTQALCPWRSHFNLLQNPSWSSPLPPPSSPPPSRSLASLILGH* 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g0774 384 ProSiteProfiles PPC domain profile profile. 114 251 IPR005175 -
Dod08g0774 384 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 48 272 IPR014476 GO:0003680
Dod08g0774 384 Gene3D - 118 252 - -
Dod08g0774 384 CDD DUF296 120 191 IPR005175 -
Dod08g0774 384 Coils Coil 24 44 - -
Dod08g0774 384 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 48 272 - -
Dod08g0774 384 Pfam Plants and Prokaryotes Conserved (PCC) domain 119 230 IPR005175 -
Dod08g0774 384 MobiDBLite consensus disorder prediction 13 30 - -
Dod08g0774 384 MobiDBLite consensus disorder prediction 1 114 - -
Dod08g0774 384 MobiDBLite consensus disorder prediction 46 67 - -
Dod08g0774 384 MobiDBLite consensus disorder prediction 360 384 - -
Dod08g0774 384 MobiDBLite consensus disorder prediction 31 45 - -
Dod08g0774 384 SUPERFAMILY AF0104/ALDC/Ptd012-like 115 244 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g0774 Dod-Chr8 9216206 9218057 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g0774 1 270 AT-hook Motif Nuclear Localized (AHL) Family AT3G55560 54.639 2.38e-67 214
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g0774 - - qsu:112039774 275.404