Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g0765 ATGCAAGTTTCTTTTTTCCCTGGAATCAATATTTATAGGGGACGGTGGGATCTGTCTGCTCACATTTCAGATTGTGCTCTGTTAAGTTTTCTTGATCTGTTTTTAAATTTACAACTCAACAGGAAAAGCGAAAGGCATATCACAATGAAGGCACTGATTCTGGTTGGAGGGTTTGGAACAAGGTTGAGGCCATTGACACTCAGTTTCCCCAAGCCTCTTGTTGATTTTGCTAATAAGCCCATGATTCTGCATCAGATAGAGGCTCTTAAGGCCATTGGAGTTAGTGAAGTGGTTCTAGCTATCAACTACCAACCAGAGGTTATGTTGAATTTTTTGAAGGATTTTGAAGCAAACCTTGGCATCAAGATCACATGTTCTCAAGAAACTGAACCATTGGGAACTGCAGGCCCGTTGGCCCTTGCCCGGGATAAGCTGATAGATGACTCTGGAGAGCCATTTTTTGTTCTCAACAGTGATGTCATCAGTGAGTACCCACTTAAAGAAATGATTGAATTCCACAAGGCTCATGGAGGAGAGGCTTCCATAATGGTGACAAAGGTTGATGAGCCTTCAAAATACGGTGTGGTTGTGATGGAGGAGACCACAGGGAAGGTTGAGAAATTTGTGGAAAAGCCAAAGCTATTTGTTGGTAACAAAATCAATGCTGGAATCTACTTGTTGAACCCCTCTGTTTTGGATCGAATTGAACTGAGGCCCACTTCTATTGAGAAAGAGGTCTTTCCAAAGATTGCAGCGGAGAATAAGCTATATGCAATGGTCCTGCCCGGATTCTGGATGGACATTGGACAACCAAGGGACTATATTACTGGCCTGAGACTCTACTTGGACTCATTGAGGAAAAAGTCTTCTCCTAAGTTGGCCAGTGGCCCTCACATTGTGGGGAATGTCATTGTGGATGAGACTGCCAAAATTGGCGAGGGATGTCTTATTGGACCCGATGTTGCTATTGGTCCTGGCTGCATTGTTGAGCCAGGTGTTAGGCTCTCACGCTGCACTGTAATGCGAGGAGTCCGGATTAAGAAGCATGCTTGCATATCCAGCAGCATTATTGGGTGGCATTCCACCGTCGGGCAATGGGCTCGAGTAGAGAATATGACTATCCTCGGAGAAGATGTCCATGTATGTGATGAAATTTACAGCAATGGTGGCGTGGTTTTGCCCCACAAGGAGATCAAATCAAGTATTCTGAAGCCAGAGATAGTCATGTGA 1230 0.4455 MQVSFFPGINIYRGRWDLSAHISDCALLSFLDLFLNLQLNRKSERHITMKALILVGGFGTRLRPLTLSFPKPLVDFANKPMILHQIEALKAIGVSEVVLAINYQPEVMLNFLKDFEANLGIKITCSQETEPLGTAGPLALARDKLIDDSGEPFFVLNSDVISEYPLKEMIEFHKAHGGEASIMVTKVDEPSKYGVVVMEETTGKVEKFVEKPKLFVGNKINAGIYLLNPSVLDRIELRPTSIEKEVFPKIAAENKLYAMVLPGFWMDIGQPRDYITGLRLYLDSLRKKSSPKLASGPHIVGNVIVDETAKIGEGCLIGPDVAIGPGCIVEPGVRLSRCTVMRGVRIKKHACISSSIIGWHSTVGQWARVENMTILGEDVHVCDEIYSNGGVVLPHKEIKSSILKPEIVM* 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g0765 409 Pfam Bacterial transferase hexapeptide (six repeats) 309 343 IPR001451 -
Dod08g0765 409 Pfam Nucleotidyl transferase 50 277 IPR005835 GO:0009058|GO:0016779
Dod08g0765 409 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 48 281 IPR029044 -
Dod08g0765 409 SUPERFAMILY Nucleotide-diphospho-sugar transferases 49 360 IPR029044 -
Dod08g0765 409 Gene3D Hexapeptide repeat proteins 285 404 - -
Dod08g0765 409 PANTHER SUGAR-1-PHOSPHATE GUANYL TRANSFERASE 33 409 - -
Dod08g0765 409 CDD M1P_guanylylT_B_like_N 49 282 IPR045233 GO:0004475|GO:0005525|GO:0009298
Dod08g0765 409 PANTHER GLUCOSE-1-PHOSPHATE ADENYLYLTRANSFERASE FAMILY PROTEIN-RELATED 33 409 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g0765 Dod-Chr8 9125063 9128077 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g0765 49 195 Eukaryotic Initiation Factors Gene Family AT4G18300 24.516 3.77e-09 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g0765 K00966 - qsu:112031576 696.041
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g0765 08 9125063 9128077 Dod08g0765 08 9125063 9128077 ECH
Dod04g0296 04 3665520 3669907 Dod08g0765 08 9125063 9128077 PCT