Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g0754 ATGGGGGAGAATTTCGAGCACTCCCATGTCCCACAACAAAGCAGAAGGAACAAGCTCCGAGTCATGGCCCAAACCCATCAACCACAACCATTCCCTCCCTCATTTCAAACCACCACACCACTACCCTTTCAAGTTTCATCACCATTTAATCCCAACAACCCCCTTTTCAACAACTTAAGTTCCCCAACAACTCACTTCAACAACACTAAATCACTCCATTCCTTTCACTTTCTGACAAAGGGTACTTCGTGTTCTGCTTCTTCTTCACACCTAGAAGAATACCCTACAAACCTTCACGACCTTCCATCGCATTTAGTGGTGCATGCTTCCCAAGAGCCATGCAGTGATGATCTGAGAAACTGGGGTCCTGTGGTTCCCTTTACAGGCTACGCTTCCATCTTGAAGAGGTCAAGGTTTTTGAAGCCTGCTCAGCAGCTTCTTGAAGACTTGTGTGGTAGTGTTTTGGATCCTCCACCGTTTGATGGTTTAACTGAAAATGGTGATCATGAAGACCCCACTGGTGGCAATGGAGTTCAGCATCAATGGAGGGATTCTATACTGGGGTGCATGCTAGAGGAGGTATACAAGAAGTATATCCTGTACTGCCAGCAGATGCAATCAGTGGTGGCATCATTTCAAAAGGTTGCTGGGCTTGGAAATGCCACTCCTTACATATCATTCGGCATCAAAACCATTTCCAAGCATTTTGGATGTTTGAAACATGCTATTTATGACCAACTTCAGTTCACAAGCAGGAGCACTCCTGCAGCTAACAATTCTGTTGGAACTGGAATTTTGAAGCTTTTGACATTTGAGAAAGGTCTTCAGCCATCAGAACCAGTGCAGAGCTTACATACTATCCAACCTACTTTGAGACCCCAAAGAGGGCTTCCAGATCATGCTGTAGCTTTGTTTAGGAAATGGCTCTTTGAACACTTCTTACACCCTTATCCTACTGATTCTGAAAAGGATACATTGGCTCAACAAACTGGTCTTTCAAGATGTCAGGTTTCAAATTGGTTCATCAATGCAAGAGTGAGAATCTGGAAGCCCATGGTGGAAGAGATGCATATGCAAGGGGAACAGCAGGCTCAACCATCACAAGTGGACCATAATTCAAGCATGACTACTGTTGGCCCATTTACAGCATATCACAAGCCCATGTGA 1167 0.4473 MGENFEHSHVPQQSRRNKLRVMAQTHQPQPFPPSFQTTTPLPFQVSSPFNPNNPLFNNLSSPTTHFNNTKSLHSFHFLTKGTSCSASSSHLEEYPTNLHDLPSHLVVHASQEPCSDDLRNWGPVVPFTGYASILKRSRFLKPAQQLLEDLCGSVLDPPPFDGLTENGDHEDPTGGNGVQHQWRDSILGCMLEEVYKKYILYCQQMQSVVASFQKVAGLGNATPYISFGIKTISKHFGCLKHAIYDQLQFTSRSTPAANNSVGTGILKLLTFEKGLQPSEPVQSLHTIQPTLRPQRGLPDHAVALFRKWLFEHFLHPYPTDSEKDTLAQQTGLSRCQVSNWFINARVRIWKPMVEEMHMQGEQQAQPSQVDHNSSMTTVGPFTAYHKPM* 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g0754 388 SMART HOX_1 291 355 IPR001356 GO:0003677
Dod08g0754 388 Pfam Associated with HOX 177 243 IPR006563 -
Dod08g0754 388 ProSiteProfiles 'Homeobox' domain profile. 288 351 IPR001356 GO:0003677
Dod08g0754 388 PANTHER BEL1-LIKE HOMEODOMAIN PROTEIN 9 67 371 - -
Dod08g0754 388 SMART prehox3 128 245 IPR006563 -
Dod08g0754 388 CDD homeodomain 292 352 IPR001356 GO:0003677
Dod08g0754 388 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 67 371 - -
Dod08g0754 388 MobiDBLite consensus disorder prediction 361 381 - -
Dod08g0754 388 SUPERFAMILY Homeodomain-like 292 359 IPR009057 -
Dod08g0754 388 Pfam Homeobox KN domain 308 347 IPR008422 GO:0003677|GO:0006355
Dod08g0754 388 MobiDBLite consensus disorder prediction 361 380 - -
Dod08g0754 388 Gene3D - 288 365 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g0754 Dod-Chr8 9049071 9052549 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g0754 119 358 Homeobox Transcription Factor Family AT5G02030 47.893 4.11e-64 213
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Dod08g0754 POX 5.7e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g0754 - - adu:107457744 462.225
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g0754 08 9049071 9052549 Dod08g0754 08 9049071 9052549 ECH