Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g0737 ATGTCAATGTTGGGTACTGAGGACAAGTCTCATGTTGTTGTTGACATAGCAGGCAACAATGGCAGTGAAGGATGTTCTTCTGATGAGGAGCAAAGTTGTTCCAACCATTCTGATCCTGAGATTGTTGTTGGCGTGCCTGAGAAAGGGAGAGGATCCTCTGCATCAGAGTGTTCAGTGGAAGTGGTGGATCTGGAGGAGAGTGCAGTGCCTGATGGTGGTGATGATGATGTGAAGGTGCATTTGGATAAGGTGGAGAGGGATTGCAGGATTTGCCACCTCAGCATGGACATGACCAACCATGAATCTGGGACCCCCATTGAGCTGGGGTGCTCTTGCAAGGATGATTTGGCTGCTGCTCACAAACACTGTGCTGAGGCTTGGTTCAAGATCAAGGGGAACAAAACTTGTGAAATTTGTGGATCAATTGCACACAATGTACCTGGTTCAGTGGAAGTTCAGATGACAGAACAGTGGAATGAAGCAAATGATGCTTCCGTGGTACCACCAACTGGACCTGCTGCGCCCTCGGCAGAAACTCGAAGCTTCTGGCAGGGACACCGTTTCTTGAATTTCCTACTAGCATGTATGGTTTTTGCCTTTGTCATATCCTGGCTTTTCCACTTTAATGTGCCCTCATGA 639 0.4804 MSMLGTEDKSHVVVDIAGNNGSEGCSSDEEQSCSNHSDPEIVVGVPEKGRGSSASECSVEVVDLEESAVPDGGDDDVKVHLDKVERDCRICHLSMDMTNHESGTPIELGCSCKDDLAAAHKHCAEAWFKIKGNKTCEICGSIAHNVPGSVEVQMTEQWNEANDASVVPPTGPAAPSAETRSFWQGHRFLNFLLACMVFAFVISWLFHFNVPS* 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g0737 212 SUPERFAMILY RING/U-box 85 142 - -
Dod08g0737 212 PANTHER RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEIN 22 212 - -
Dod08g0737 212 MobiDBLite consensus disorder prediction 1 52 - -
Dod08g0737 212 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 75 147 IPR013083 -
Dod08g0737 212 CDD RING_CH-C4HC3_MARCH 88 140 - -
Dod08g0737 212 MobiDBLite consensus disorder prediction 20 38 - -
Dod08g0737 212 SMART ringv_2 87 140 IPR011016 GO:0008270
Dod08g0737 212 Pfam RING-variant domain 88 139 IPR011016 GO:0008270
Dod08g0737 212 ProSiteProfiles Zinc finger RING-CH-type profile. 80 146 IPR011016 GO:0008270
Dod08g0737 212 PANTHER ZINC FINGER, RING-CH-TYPE 22 212 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g0737 Dod-Chr8 8822727 8826369 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g0737 14 212 C3H Transcription Factor Family AT5G05830 59.799 4.89e-73 218
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g0737 - - adu:107457785 310.842
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod07g1442 07 39061556 39065143 Dod08g0737 08 8822727 8826369 ECH
Dod08g0737 08 8822727 8826369 Dod08g0737 08 8822727 8826369 ECH