Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g0736 ATGACCGAAGAAGACCGAGCCTCCGCCGAGCCAACCGCCGGAAATGGCGTCGCCGACACGGAGCCCCGCGATGTCGCGGCGGAGACCGAAGCAGCTGGCGGCGATGCTGCTGAGGTGACGGTGGTCGGAGACGGCGGTGCGGGAAGAGTGAAGGGACCGTGGTCGCCGGAGGAGGACGCGGTGCTGAGCCGGCTGGTGGCGCAGTTCGGGGCGAGAAATTGGAGCATGATCGCGCGCGGAGTTCCCGGACGGTCAGGTAAGTCGTGCCGGCTCCGGTGGTGTAACCAGCTGGACCCTTGCGTCAAACGGAAGCCCTTCACTGAGGAAGAGGACAATATTATTGTGTCAGCCCATGCAGTCCATGGGAACAAATGGGCAGCAATTGCAAGGCTTCTTCCAGGGAGAACAGATAATGCTATCAAGAATCACTGGAACTCTACTCTAAAGCGCAGATGTATGGAACAGGGAAGATATGTACCACTACGTGCTGATGTGATGGAAGATGGTAGCATTGAGAAAACTAAGGCATCCTCTGAAGAAACCATATCAATTGGGGATATAAATTCATTCAATCCTACAGAAGCTAGAAATGTCGTGATGAATAATGAGATTAAACAGTATGAAGATCAACCTCCAAGAACAGATGGTGCTGAAGTTGAGGGAAATCCAACCCTTCATCGGCCAGTAGCACGTGTTAGTGCATTTAGTTTATACAATCCTCCAAGCAGGCCAACAACTGGATCATGTTCAAAGAATCCCCCAGTACAGAACCCTTTGATCCAACTACCCAAAGCAGATGAAGGATCCCGCAAGTTATTTGATGGTATTGGATGTGAGCCCTTGGTTCCATTGCAATGTGGTCATGGCTGCTGTGCTGCAGATTCAGGGGGAAGACATTCTCATGGTTCAATATTAGGTCCTGAGTTTGTTGACTATGTGGAGTCTCCCCCTTACTCCAGTCATGAATTGATTTCCATAGCAACTGACTTAAACAACATGGCTTGGATCAAGAGTGGCCTTGAGAACCACGGTACCAAAGTAAGTGAGACTACTGCAAACTTGACAGCATTCCAAGGGGCTGCCACTGCTTCACAAACAAGCTTCCTAGGACAAGGTAGAAAGAATGACTACATGCAATATGAGGAGGGACCTGGCAAGTTTTTGGGTACGATGCAACAAGTGTTATCAGCGAAGATGCCTAGGCAGCATTTTGCAATGCCTGCAGAAGTTTGA 1233 0.502 MTEEDRASAEPTAGNGVADTEPRDVAAETEAAGGDAAEVTVVGDGGAGRVKGPWSPEEDAVLSRLVAQFGARNWSMIARGVPGRSGKSCRLRWCNQLDPCVKRKPFTEEEDNIIVSAHAVHGNKWAAIARLLPGRTDNAIKNHWNSTLKRRCMEQGRYVPLRADVMEDGSIEKTKASSEETISIGDINSFNPTEARNVVMNNEIKQYEDQPPRTDGAEVEGNPTLHRPVARVSAFSLYNPPSRPTTGSCSKNPPVQNPLIQLPKADEGSRKLFDGIGCEPLVPLQCGHGCCAADSGGRHSHGSILGPEFVDYVESPPYSSHELISIATDLNNMAWIKSGLENHGTKVSETTANLTAFQGAATASQTSFLGQGRKNDYMQYEEGPGKFLGTMQQVLSAKMPRQHFAMPAEV* 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g0736 410 CDD SANT 105 148 IPR001005 -
Dod08g0736 410 PANTHER MYB TRANSCRIPTION FACTOR-LIKE PROTEIN 2 343 - -
Dod08g0736 410 SMART sant 50 99 IPR001005 -
Dod08g0736 410 SMART sant 102 150 IPR001005 -
Dod08g0736 410 ProSiteProfiles Myb-like domain profile. 46 97 IPR001005 -
Dod08g0736 410 PANTHER MYB PROTEIN-RELATED 2 343 - -
Dod08g0736 410 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 98 152 IPR017930 -
Dod08g0736 410 Gene3D - 104 176 - -
Dod08g0736 410 ProSiteProfiles Myb-like domain profile. 98 148 IPR001005 -
Dod08g0736 410 CDD SANT 53 95 IPR001005 -
Dod08g0736 410 Gene3D - 50 102 - -
Dod08g0736 410 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 46 97 IPR017930 -
Dod08g0736 410 MobiDBLite consensus disorder prediction 1 36 - -
Dod08g0736 410 SUPERFAMILY Homeodomain-like 48 144 IPR009057 -
Dod08g0736 410 Pfam Myb-like DNA-binding domain 103 147 IPR001005 -
Dod08g0736 410 Pfam Myb-like DNA-binding domain 51 97 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g0736 Dod-Chr8 8808600 8812954 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g0736 49 404 MYB Transcription Factor Family AT3G55730 46.216 1.75e-99 300
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Dod08g0736 Myb_DNA-binding 3.2e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g0736 K09422 - gmx:100781228 584.719
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g0736 08 8808600 8812954 Dod08g0736 08 8808600 8812954 ECH