Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g0720 ATGTCTGAAGCTCTGATCAATGGGTTGGCTGGAGCTGGAGGAGGGATCATTGCTCAGCTCATCACGTACCCTCTCCAAACTGTAAACACTCGTCAACAAACCGAGCGTGATCTGAAGAAGGAAAAGAGGAATCTAGGGACTCTCCAGCAAATGTGCCAGGTTGTGAAACACGAGGGGTGGGAGCGGTTGTATGGAGGCTTGATGCCATCTCTAGTGGGTACAGCTGCGTCTCAGGGTGTTTACTATTATTTCTATCAAATATTCAGGAACAGAGCTGAATTGGCTGCACTAGAACAGAAAAGGCTAGGCATGGGTGATGGATCGGTTGGAATGATCTCCTCACTTATTGTTGCTGCTTTATCTGGGTGTGTTAACGTACTCTTGACAAATCCAATATGGGTAGTTGTTACCCGCATGCAGACGCACAGAAAAGAGTCAAGCAGAACTCTGTCTGGTCAGGTGCTGCCAAATGCCACTGAACAAGCAATTCTTCCTGCAGTTGAGCCTCTTGCTTATGGAACTAGCTATGTGGTTCAAGAAGTCTACGGTGAAGCTGGAGTTTTGGGTTTCTGGAAAGGTGTATTGCCAACATTGATCATGGTAAGCAATCCTTCCATACAGTTCATGCTGTATGAAACCATGTTATTGAAGTTAAAAAGAAGACGTGCTCAGAGTAAGAAGGGCAGCGATGGGGTAACTGCTTTGGAGATATTTCTTCTTGGAGCTTTGGCTAAGCTTGGAGCTACTATTGTGACATACCCTCTTCTAGTTGTTAAGGCAAGGCTTCAAGCTAGACAGGTTAAAAGTGAAGACAAGGGACACCATTATAAAGGCACATTGGATGCTATTATCAAGATGATCCGCTATGAAGGGTTTTATGGATTTTACAAGGGCATGGGCACTAAAATCGTACAAAGTGTGCTAGCTGCTGCTGTTTTGTTCATGGTGAAGGAAGAATTAGTTAGACAGACTCGTTTCTTGCTCACTAAGAATGCCCCCAACCGAATAAAGCCAAAGCTTCTGTGA 1026 0.4483 MSEALINGLAGAGGGIIAQLITYPLQTVNTRQQTERDLKKEKRNLGTLQQMCQVVKHEGWERLYGGLMPSLVGTAASQGVYYYFYQIFRNRAELAALEQKRLGMGDGSVGMISSLIVAALSGCVNVLLTNPIWVVVTRMQTHRKESSRTLSGQVLPNATEQAILPAVEPLAYGTSYVVQEVYGEAGVLGFWKGVLPTLIMVSNPSIQFMLYETMLLKLKRRRAQSKKGSDGVTALEIFLLGALAKLGATIVTYPLLVVKARLQARQVKSEDKGHHYKGTLDAIIKMIRYEGFYGFYKGMGTKIVQSVLAAAVLFMVKEELVRQTRFLLTKNAPNRIKPKLL* 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g0720 341 Coils Coil 31 51 - -
Dod08g0720 341 ProSiteProfiles Solute carrier (Solcar) repeat profile. 2 91 IPR018108 -
Dod08g0720 341 SUPERFAMILY Mitochondrial carrier 4 319 IPR023395 -
Dod08g0720 341 Gene3D Mitochondrial carrier domain 9 329 IPR023395 -
Dod08g0720 341 PANTHER PEROXISOMAL NICOTINAMIDE ADENINE DINUCLEOTIDE CARRIER 1 338 - -
Dod08g0720 341 PANTHER MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED 1 338 IPR044712 GO:0006862|GO:0055085
Dod08g0720 341 ProSiteProfiles Solute carrier (Solcar) repeat profile. 232 323 IPR018108 -
Dod08g0720 341 Pfam Mitochondrial carrier protein 6 90 IPR018108 -
Dod08g0720 341 Pfam Mitochondrial carrier protein 109 218 IPR018108 -
Dod08g0720 341 Pfam Mitochondrial carrier protein 233 322 IPR018108 -
Dod08g0720 341 ProSiteProfiles Solute carrier (Solcar) repeat profile. 109 217 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g0720 Dod-Chr8 8625882 8631886 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g0720 24 329 Chloroplast and Mitochondria Gene Families AT2G47490 28.481 6.40e-29 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g0720 K13354 - gmx:100775784 533.872
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g0720 08 8625882 8631886 Dod08g0720 08 8625882 8631886 ECH