Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g0717 ATGATTAGTACAAAAGTCATTTTATTGTCCCACAGTCGAAAGATTGAAGTGATATTTTGGGGTGAGGAAAAAGAGGGTCGCCGCAAGGAGACTCATCGGATCAACTATTGCATTTACTTAAACCCTACACAAACAAAACATCATCACAAACAACAGCAATGCCTTCTTCTGCACCCAACTTGCTTTCAAAATGCACCGTCTTACCAGACCAAACCTCCACACTGGGTAACCTCAAACTCTCCGTTTCGGACCTTCCCATGTTGTCCTGTCACTACATCCAAAAAGGTTGCCTCTTCACCCAACCATCCCACCCTTCCCACGACCTCATCCCTCTCCTACAGTCCGCCCTCGCCCGCACCCTCTCCCTCTTCCCCCCTCTCGCCGGCCGTCTTACCACCGACCCCGGACGGTTACGTATACATCGCTTGCAACGACGCCGGCGTCGATTTCCTCCACGCCTCCGCCGCCGGCCTCCGCGTGTGCGACCTCCTCTCCCCCACCGACGTCCATGAGTCCTTCAAGGAATTCTTCACCTTCGACAGGAAAGTCAGTTACAGAGGCCATTCCTCCCCTATCATGGCCGTTCAGGTCACCGAGCTCGCCGACGGAGTCTTCATCGGCTGCGCCGTTAACCACTCCGTCACCGACGGAACCTCCTTCTGGAACTTCTTCAACACGTTCGCTCAGGTCTGCAGAGGCGCAAGCAAGAGTCTCCGCAACGTCCCGGACTTCCACCGCGACTCCGTCCTCATCTCCGACGCCGTCCTCCGCTTGCCGGAAGGCGGACCGAAGGTCACGTTCAACGCCGACGCCCCGCTGCGCGAGAGGATCTTCAGCTTCAGCCGCGAAGCGATTCAGAAGCTGAAAGCCAAAGCCAATAACCGAAAACGGACGAGGCCAAATAACGCCGTCGAGCTGATGAGGAAGCAAATCAACGACAACATTTTCCAAAAAGAAAACGATAACGGCAAGGTCACGGCGATACTCGAGAACTGGCTCAAGAGCGCGGTTAAAACAGAAACGGTTACGGATACGGTTACAGAAACGGTTACGAATACGGTTACAACCGGGGAAACCGCCGAGATTTCGTCTTTCCAGTCGGTATGCGCGCTGCTTTGGCGCGCGGTGACTCGGGCGAGGAAGTTTCCTGCTTCGAAAACGACGACTTTCAGAATGGCGGTTAATTGCCGCCACAGGATAGAGCCTAAATTGGAAGCGTACTACTTCGGGAACGCGATTCAGAGCGTTCCGACTTACGCTTCAGCTGGGGAAGTGCTTTCCCGTGATCTGCGGTGGTGTGCGGAGCAGCTGAACAAGAGCGTGAAGGCGCACGACGACGCTATGGTGCGGCGGTTCGTGGAGGATTGGGAGCGGAGCCCGCGGTGTTTTCCGCTGGGAAACCCTGACGGCGCGTCGATAACGATGGGGAGCTCGCCGAGGTTTCCGATGTACGACAACGATTTCGGGTGGGGCAAGCCGTTGGCGGTGAGGAGTGGGAAGGCGAATAAATTCGACGGCAAGATCTCGGCGTTTCCGGGGAGGGACGGAAGCGGGACCGTTGATTTGGAGGTGGTTTTGGCGCCGGACACGATGGCGGGGCTTGAGGCTGATCCAGAGTTTATGATCGCAGTTCCAACGCATGGAGGCCCAGTGGGGGCATGGTAA 1665 0.5616 MISTKVILLSHSRKIEVIFWGEEKEGRRKETHRINYCIYLNPTQTKHHHKQQQCLLLHPTCFQNAPSYQTKPPHWVTSNSPFRTFPCCPVTTSKKVASSPNHPTLPTTSSLSYSPPSPAPSPSSPLSPAVLPPTPDGYVYIACNDAGVDFLHASAAGLRVCDLLSPTDVHESFKEFFTFDRKVSYRGHSSPIMAVQVTELADGVFIGCAVNHSVTDGTSFWNFFNTFAQVCRGASKSLRNVPDFHRDSVLISDAVLRLPEGGPKVTFNADAPLRERIFSFSREAIQKLKAKANNRKRTRPNNAVELMRKQINDNIFQKENDNGKVTAILENWLKSAVKTETVTDTVTETVTNTVTTGETAEISSFQSVCALLWRAVTRARKFPASKTTTFRMAVNCRHRIEPKLEAYYFGNAIQSVPTYASAGEVLSRDLRWCAEQLNKSVKAHDDAMVRRFVEDWERSPRCFPLGNPDGASITMGSSPRFPMYDNDFGWGKPLAVRSGKANKFDGKISAFPGRDGSGTVDLEVVLAPDTMAGLEADPEFMIAVPTHGGPVGAW* 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g0717 554 PANTHER ANTHOCYANIN 5-AROMATIC ACYLTRANSFERASE 134 545 - -
Dod08g0717 554 Gene3D - 117 257 IPR023213 -
Dod08g0717 554 Pfam Transferase family 135 541 - -
Dod08g0717 554 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 134 545 - -
Dod08g0717 554 Gene3D - 272 538 IPR023213 -
Dod08g0717 554 MobiDBLite consensus disorder prediction 92 128 - -
Dod08g0717 554 MobiDBLite consensus disorder prediction 92 112 - -
Dod08g0717 554 MobiDBLite consensus disorder prediction 113 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g0717 Dod-Chr8 8583512 8593824 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g0717 136 535 Monolignol Biosynthesis Gene Families AT5G48930 25.000 3.23e-24 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g0717 - - gmx:100500612 654.825
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g0717 08 8583512 8593824 Dod04g0332 04 4326453 4328682 ECH
Dod08g0717 08 8583512 8593824 Dod08g0717 08 8583512 8593824 ECH
Dod08g0717 08 8583512 8593824 Dod04g0332 04 4326453 4328682 PCT