Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g0715 ATGGATGTGATAAAGACGCAGCAAATATCATCGTGGAGAGCGATAGAGAAAGTGATAGTGCACCCTCTTGTGCTGCTCAGCATAGTCGACAACTACAACAGGGTCGCTAAGGACACCCGCAAGCGCATCGTCGGCCTCGTCCTTGGCTCCTCTTTTAAAGGCACCGTCGACGTTACCAACAGCTACGCCCTGCCGTTTGAAGAAGATGACAAGGATCCTTCCATCTGGTTCCTTGACCACAATTACCACGAGTCCATGTTTTCCATGTTTAAGAGAATTAACGATAACCACAGCACTCTTCATATAAATGATGAACAATCAGTTCTTGCTTGGCGATCTGCAAATAATTGTAGCTTAAGTCAGCAAGTCATGTGCCTAGTGCTGTTCAGCAATATCCCTATCAAGGATTGCACCGTTCTGTTCCTCAGCATCTGGCAGCGTGCTTGGATTCCCTTTAGTAATGTTTCTGTGTTATTCACTTGTTCTGATTATAGTCTACGCTATGTGCCAAATCCTGTCTTGATTATAATTGATGTTGAACCTAAGGAGGTGGGAATTCCAACCAAAGCTTACTATGCAATTGAAGAGGTTAAAGAGAATGCCACTCAGAAAAGCCAAAAGGTCTTTGTGCATGTGCCATCAGAAATTGCTGCACATGAAGTTGAGGAAATAGGGGTGGAACACCTGCTTCGAGATGTGAAAGATACAACAATTAGCACCCTTGCAACAGAGGTCAGTGCAAAACTCACAGCATTGAAGGGTTTGGATGCGAGACTTAAAGAGTAA 786 0.4427 MDVIKTQQISSWRAIEKVIVHPLVLLSIVDNYNRVAKDTRKRIVGLVLGSSFKGTVDVTNSYALPFEEDDKDPSIWFLDHNYHESMFSMFKRINDNHSTLHINDEQSVLAWRSANNCSLSQQVMCLVLFSNIPIKDCTVLFLSIWQRAWIPFSNVSVLFTCSDYSLRYVPNPVLIIIDVEPKEVGIPTKAYYAIEEVKENATQKSQKVFVHVPSEIAAHEVEEIGVEHLLRDVKDTTISTLATEVSAKLTALKGLDARLKE* 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g0715 261 Gene3D Cytidine Deaminase, domain 2 11 240 - -
Dod08g0715 261 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT F-RELATED 1 96 - -
Dod08g0715 261 Pfam JAB1/Mov34/MPN/PAD-1 ubiquitin protease 14 97 IPR000555 GO:0005515|GO:0008233|GO:0008237
Dod08g0715 261 PANTHER 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 7 167 261 - -
Dod08g0715 261 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT F-RELATED 167 261 - -
Dod08g0715 261 SMART pad1_6 17 164 IPR000555 GO:0005515|GO:0008233|GO:0008237
Dod08g0715 261 PANTHER 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 7 1 96 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g0715 Dod-Chr8 8577287 8581001 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g0715 20 115 Eukaryotic Initiation Factors Gene Family AT2G39990 31.959 3.20e-09 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g0715 K03038 - gmx:100790393 332.798
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g0715 08 8577287 8581001 Dod04g0335 04 4359552 4365236 ECH
Dod08g0715 08 8577287 8581001 Dod08g0715 08 8577287 8581001 ECH