Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g0714 ATGGACGAGGGCATGTCAGGCTTTTGTGTTAGAGGTGGAAGTGTCCGTGGTAAAGGTGGCAGCACTGGCACCAAGTGTGGGCGTTGGAATCCCACTGCTGAACAGGTTAAGCTCCTGACTGAACTGTTCAGGTCTGGTCTCCGCACCCCAAGCACTGATCAGATTCAAAAGATCTCCACTCAGCTCAGCTTTTATGGTAAGATAGAGAGCAAGAACGTGTTCTATTGGTTCCAAAACCATAAGGCCAGGGAAAGACAGAAGCGCCGTAAGGTTTCCTTTGATGATGACAAGGATGTGATCAACAAAGAAAATTGTTTGAATGCTCCTACACAAAGCTTTGCTGAGATGTACCAAGTTTCAAAGCCTGATAGGGTGATTGAGACTCTCCAGCTCTTCCCCTTGAACTCATTTGGTGAATCAGAATCAGAGAATAAGCTGAGGGTGCATCATGCAAATGAATGCAGGGATGATACTATTTTCTCATACACAATGGAAGAACAAATGGAGCATCCTCCATTAGACCTGCGCTTGAGCTTTCTGTAA 543 0.4567 MDEGMSGFCVRGGSVRGKGGSTGTKCGRWNPTAEQVKLLTELFRSGLRTPSTDQIQKISTQLSFYGKIESKNVFYWFQNHKARERQKRRKVSFDDDKDVINKENCLNAPTQSFAEMYQVSKPDRVIETLQLFPLNSFGESESENKLRVHHANECRDDTIFSYTMEEQMEHPPLDLRLSFL* 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g0714 180 CDD homeodomain 28 88 IPR001356 GO:0003677
Dod08g0714 180 SUPERFAMILY Homeodomain-like 27 89 IPR009057 -
Dod08g0714 180 SMART HOX_1 24 91 IPR001356 GO:0003677
Dod08g0714 180 PANTHER WUSCHEL-RELATED HOMEOBOX 7 1 169 - -
Dod08g0714 180 Gene3D - 25 93 - -
Dod08g0714 180 Pfam Homeodomain 26 86 IPR001356 GO:0003677
Dod08g0714 180 ProSiteProfiles 'Homeobox' domain profile. 22 87 IPR001356 GO:0003677
Dod08g0714 180 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 1 169 IPR044555 GO:0003700|GO:0099402
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g0714 Dod-Chr8 8573968 8574884 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g0714 8 180 Wox Gene Family AT3G11260 57.672 2.10e-63 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Dod08g0714 Homeodomain 5.6e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g0714 - - pvu:PHAVU_008G226100g 290.812
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g0334 04 4354345 4355009 Dod08g0714 08 8573968 8574884 PCT