Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g0713 ATGGCGTCGAGCGAGCGCACGGTGTTGCAGTTCTATGCTCCTTCTTCTTCGACCTTGTCGGCGAAGGTGCACCCTCTCGTGATCTTCAACATCTGCGACTGCTACGTTCGGCGCCCCGACCAAGCTGAACGTGTCATCGGAACTCTACTCGGATCCGTTCTCCCCGATGGAACCGTCGATATCCGCAATTCCTATGCTGTTCCTCACACTGAGTCTGTCGATCAGGTTGCTTTGGATATTGAGTATCATCACAATATGTTGATATCTCACCAGAAAGTGAATCCAAAGGAAGTTATAGTAGGATGGTACTCAACTGGTCTTGGAGTAACTGGTGGTAGTGCATTAATCCATGAATTTTACTCCAGAGAAGTATCCAATCCAATACATTTGACTGTTGATACAGGATTCACAAATGGAGCGGGTACCATAAAAGCTTATGTTTCAAACAATTTATCTCTTGGAGAGCGGCAAATTGCTGCTCAGTTTCAAGAAATTCCTTTGGATCTTCGTATGATTGAAGCTGAACGCGTTGGATTTGACACTCTGAAGGCTACTGCTGTTGACAAAATCCCCTCTGATTTAGAAGGGATGGAAGCATCAATGCAACATCTACTGGCCTTGATTGATGACATCCACAGATATGTTGATGGTGTTGTGGAAGGGCGTACTATCCCAGACAACAACATTGGGAGATTTATATCAGATGCTGTAGGGTCCCTTCCCAAATTGCCCTCGTCTGCTTTTGATAAGCTTGTGAATGACAGCTTGCAGGATCACTTGCTATTGCTATATTTATCAAGCATCACAAGGACACAGCTTAGCCTGGCCGAAAAATTGAACACGGCTGCTCAGATCCTGTGA 861 0.4541 MASSERTVLQFYAPSSSTLSAKVHPLVIFNICDCYVRRPDQAERVIGTLLGSVLPDGTVDIRNSYAVPHTESVDQVALDIEYHHNMLISHQKVNPKEVIVGWYSTGLGVTGGSALIHEFYSREVSNPIHLTVDTGFTNGAGTIKAYVSNNLSLGERQIAAQFQEIPLDLRMIEAERVGFDTLKATAVDKIPSDLEGMEASMQHLLALIDDIHRYVDGVVEGRTIPDNNIGRFISDAVGSLPKLPSSAFDKLVNDSLQDHLLLLYLSSITRTQLSLAEKLNTAAQIL* 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g0713 286 ProSiteProfiles MPN domain profile. 21 152 IPR037518 -
Dod08g0713 286 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT F 10 285 IPR027531 GO:0003743|GO:0005852|GO:0006413|GO:0031369
Dod08g0713 286 Hamap Eukaryotic translation initiation factor 3 subunit F [EIF3F]. 19 282 IPR027531 GO:0003743|GO:0005852|GO:0006413|GO:0031369
Dod08g0713 286 SMART pad1_6 20 151 IPR000555 GO:0005515|GO:0008233|GO:0008237
Dod08g0713 286 Pfam Maintenance of mitochondrial structure and function 173 279 IPR024969 -
Dod08g0713 286 Pfam JAB1/Mov34/MPN/PAD-1 ubiquitin protease 18 122 IPR000555 GO:0005515|GO:0008233|GO:0008237
Dod08g0713 286 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT F-RELATED 10 285 - -
Dod08g0713 286 CDD MPN_eIF3f 22 279 IPR027531 GO:0003743|GO:0005852|GO:0006413|GO:0031369
Dod08g0713 286 Gene3D Cytidine Deaminase, domain 2 9 187 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g0713 Dod-Chr8 8563442 8566495 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g0713 2 286 Eukaryotic Initiation Factors Gene Family AT2G39990 76.289 1.43e-158 441
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g0713 K03249 - gmx:100811797 489.96