Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g0712 ATGTGTCGTTGGGAGCGAACAAGTTTCCCGGAGAGGCAGCCGATAGGGACAGCGGCGCAGAGCCAAGATGAGGCGAAGGACTACCAGGAGCCTCCGCCGGCGCCGCTGTTCGAGCTGTCGGAGCTGTCGTCGTGGTCGTTCTACAGAGCAGGGATAGCGGAGTTCGTGGCGACTTTCTTGTTCCTGTACATCACAATCTTGACGGTGATGGGTGTAAACAGGTCACCTTCCAAGTGCGCCTCCGTTGGTATCCAAGGTATCGCTTGGGCCTTCGGTGGCATGATCTTCGCCCTCGTTTACTGCACCGCTGGCATCTCCGGGGGTCACATAAACCCGGCTGTGACTTTTGGATTGTTCTTGGCTCGGAAGCTGTCGTTGGTTAGGGCGGTGTTCTACATAGTGATGCAGTGCCTGGGTGCTATCTGCGGTGCTGGTGTGGTTAAAGGTTTCGAGGGCAAAAACCTGTACGGTTCCCTCGGCGGTGGTGCCAACAAAGTTAACGACGGTTACACCAAGGGTGACGGCCTCGGTGCTGAGATTGTCGGAACCTTCATCCTTGTCTACACCGTTTTCTCTGCCACCGATGCCAAGCGTAGCGCTAGAGACTCTCACCAGATTCTGGCACCTTTGCCTATTGGGTTCGCTGTGTTCTTGGTGCACTTGGCCACAATCCCCATCACCGGAACCGGGATCAACCCTGCTCGCAGTCTCGGTGCTGCCATCATCTTTGACAAACACGATGGCTGGCATGAACACTGGGTCTTCTGGGTGGGACCGTTCATCGGTGCAGCTCTCGCAGCTATCTACCATGTGGTCGTAATCAGAGCCATTCCCTTCAAGTCCAAGTGA 849 0.5595 MCRWERTSFPERQPIGTAAQSQDEAKDYQEPPPAPLFELSELSSWSFYRAGIAEFVATFLFLYITILTVMGVNRSPSKCASVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLVRAVFYIVMQCLGAICGAGVVKGFEGKNLYGSLGGGANKVNDGYTKGDGLGAEIVGTFILVYTVFSATDAKRSARDSHQILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFDKHDGWHEHWVFWVGPFIGAALAAIYHVVVIRAIPFKSK* 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g0712 282 Gene3D Glycerol uptake facilitator protein. 34 280 IPR023271 -
Dod08g0712 282 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 8 282 IPR034294 -
Dod08g0712 282 CDD MIP 49 273 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dod08g0712 282 ProSitePatterns MIP family signature. 109 117 IPR022357 -
Dod08g0712 282 TIGRFAM MIP: MIP family channel proteins 53 269 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dod08g0712 282 PRINTS Major intrinsic protein family signature 253 273 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dod08g0712 282 PRINTS Major intrinsic protein family signature 128 147 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dod08g0712 282 PRINTS Major intrinsic protein family signature 91 115 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dod08g0712 282 PRINTS Major intrinsic protein family signature 178 196 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dod08g0712 282 PRINTS Major intrinsic protein family signature 49 68 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dod08g0712 282 PRINTS Major intrinsic protein family signature 213 235 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dod08g0712 282 SUPERFAMILY Aquaporin-like 41 274 IPR023271 -
Dod08g0712 282 Pfam Major intrinsic protein 41 270 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dod08g0712 282 PANTHER MAJOR INTRINSIC PROTEIN, AQUAPORIN-LIKE PROTEIN-RELATED 8 282 - -
Dod08g0712 282 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g0712 Dod-Chr8 8557449 8559772 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g0712 7 282 Major Intrinsic Protein MIP AT3G61430 84.116 5.63e-159 442
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g0712 K09872 - gmx:100780145 479.174
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g0712 08 8557449 8559772 Dod08g0712 08 8557449 8559772 ECH
Dod04g0336 04 4370388 4372925 Dod08g0712 08 8557449 8559772 PCT