Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g0692 ATGAAGAACAAACCACCCTCCTCCGCCGCTGTCACCGCCACCACCACCATCACCGTCATCGCCGCTGTGTTCATCCTCCTCACCTTCACAACACCCTCCTCCCATGCGCTCGGCTCCGGCACCACCCTCGCCGTCACTGACGCCTCCGCCACCGTCTGCGGCATCGTTTCAGCCACCCAAACCCGCCACATCGAATGCTACCGCCGCGGCGCCTCCACCGCCCTCTCCGCCGCCCCCGACGTCAACTTCTCGTCGATATCCGGCGGCCGGAGCTACTTCTGCGGCCTCCGCTCCGGCAACCACAGCCTCCTCTGCTGGGACACAACCACCACCCTCGTAACCAAGCGAATTTACAACAATGCCACTGTTCCATTCGAGAATCTCTCCGTCGGAGACTCCCACGTTTGTGCCACGTCAGTCACGACAGGAACGGCGTCGTGTTGGAGAGTCCCAAAAGGTTTCAACTTTCCATCTGGGTCGGATCGGTTCCAATCCATTTCATCCGGGTCGGGTTTCTCTTGCGGGATTCTGAAGGAAAGTTTCAGTGTTCGGTGTTGGGGTCTTGATGGGTCGGTTGCGGGTTCTATAGAGAATGATTTTGGGAATGTTTCTATGGTGACCCTTGTTGCTGGTGGTTCACACGTGTGTGGGTTGAATTCAAATGGGTTTTTGGTGTGTAAAGGGAGTAATAGCTCTGGTCAAATTGAGGTTCCTAAAAGTGGTGCTTTTGAGTATTCTGGTTTGGCACTTGGTGATGAGCATAGCTGTGCTATTAGGCGATCCAATGGTTCTGTTGTTTGTTGGGGTGGCATTGGTTTGTTTAATGTTAATGTTGTTGAAGGTGTTTCCTTTGAGGTTATTGTTTCTGGGTCTGATTTTACTTGTGGATTGACTACACGCAATTTTTCTGTTTTGTGTTGGGGACCTGGTTGGTCTAATAGTTCAAGCCCTCCTTCGAGATCGTTGACAATTAGGCGGCAGGGGTCGAGGATCATGAGGCGGCAGAGGAGTGGAACCTCATCAACAAAGCATCCGGACAGGGCTGAGGAGTTCACCCTGGCTGAGCTTGTTGCAGCAACCAACAATTTCTCACTTGAGAACAAGATTGGTGCTGGCAGCTATGGTGTTGTATACCGAGGGAAACTTGCGGATGGCCACGAGGTCGCGATTAAGAGGGGTGAAATTGGCACTAAGATGAAGAAGTTTCAAGAGAAAGAGAGTGCATTTGAGTCAGAACTGGCCTTCTTGTCCCGTTTGCACCACAAGCATTTGGTTAGGCTTGTTGGGTTCTGTGAAGAGAAAGATGAGAGGCTCTTGGTGTACGAGTACATGAAGAATGGGGCATTGTATGATCATTTGCATGACAAGAACAATGTGGACAAGAGCAGCAGTGTCTTGAATTCTTGGAGGATGAGGATCAAGATCGCGCTGGATGCTTCGCGAGGAATCGAATACCTCCATAATTATGCTGTTCCATCCATAATCCACAGAGATATCAAGTCCTCCAATATTCTTATTGATGCCACTTGGACAGCAAGAGTGTCTGATTTTGGATTGTCATTGATGAGTCCAGATTCTGACCTTGATTGCCGGCCTACGAAAGCAGCTGGAACTGTTGGATACATTGATCCTGAGTATTATGGTCTAAATGTATTGACAGCAAAGAGTGATGTCTACGGTCTTGGAGTGGTACTGCTAGAACTCTTAACTGGAAAAAGAGCTATATTCAAGATTGGTGAAAATGGAGGCACCCCTATGAGTGTGGTAGACTTTGCAGTGCCTGCAATTATGGCCGGAGAATTGGCGAAAATTTTGGACCTGAGGGTTGATCCACCGGAGTTGAGCGAAACAGAAGCAGTGGAGCTTGTGGCCTATACTGCTATGCATTGTGTAAATTTGGAAGGGAAGGATAGACCAACAATGGCTGACATTGTGGCCAATTTGGAACGTGCTTTGGCTCTTTGTGATAGTAGCCATGGCAGCATTTCCAGTGGTACAATCTCTATTGCATCAGATTGA 2019 0.4938 MKNKPPSSAAVTATTTITVIAAVFILLTFTTPSSHALGSGTTLAVTDASATVCGIVSATQTRHIECYRRGASTALSAAPDVNFSSISGGRSYFCGLRSGNHSLLCWDTTTTLVTKRIYNNATVPFENLSVGDSHVCATSVTTGTASCWRVPKGFNFPSGSDRFQSISSGSGFSCGILKESFSVRCWGLDGSVAGSIENDFGNVSMVTLVAGGSHVCGLNSNGFLVCKGSNSSGQIEVPKSGAFEYSGLALGDEHSCAIRRSNGSVVCWGGIGLFNVNVVEGVSFEVIVSGSDFTCGLTTRNFSVLCWGPGWSNSSSPPSRSLTIRRQGSRIMRRQRSGTSSTKHPDRAEEFTLAELVAATNNFSLENKIGAGSYGVVYRGKLADGHEVAIKRGEIGTKMKKFQEKESAFESELAFLSRLHHKHLVRLVGFCEEKDERLLVYEYMKNGALYDHLHDKNNVDKSSSVLNSWRMRIKIALDASRGIEYLHNYAVPSIIHRDIKSSNILIDATWTARVSDFGLSLMSPDSDLDCRPTKAAGTVGYIDPEYYGLNVLTAKSDVYGLGVVLLELLTGKRAIFKIGENGGTPMSVVDFAVPAIMAGELAKILDLRVDPPELSETEAVELVAYTAMHCVNLEGKDRPTMADIVANLERALALCDSSHGSISSGTISIASD* 673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g0692 672 SUPERFAMILY RCC1/BLIP-II 74 310 IPR009091 -
Dod08g0692 672 PANTHER SERINE/THREONINE-KINASE CCR4-LIKE PROTEIN 14 314 - -
Dod08g0692 672 Gene3D Phosphorylase Kinase; domain 1 326 443 - -
Dod08g0692 672 MobiDBLite consensus disorder prediction 313 345 - -
Dod08g0692 672 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN CCR4 14 314 IPR044815 GO:0004674
Dod08g0692 672 Gene3D - 15 201 IPR009091 -
Dod08g0692 672 ProSiteProfiles Protein kinase domain profile. 363 652 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod08g0692 672 ProSitePatterns Protein kinases ATP-binding region signature. 369 391 IPR017441 GO:0005524
Dod08g0692 672 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN CCR4 314 670 IPR044815 GO:0004674
Dod08g0692 672 SMART serkin_6 363 652 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod08g0692 672 Gene3D - 236 325 IPR009091 -
Dod08g0692 672 ProSitePatterns Serine/Threonine protein kinases active-site signature. 494 506 IPR008271 GO:0004672|GO:0006468
Dod08g0692 672 Gene3D Transferase(Phosphotransferase) domain 1 444 661 - -
Dod08g0692 672 SUPERFAMILY Protein kinase-like (PK-like) 340 648 IPR011009 -
Dod08g0692 672 PANTHER SERINE/THREONINE-KINASE CCR4-LIKE PROTEIN 314 670 - -
Dod08g0692 672 Pfam Protein kinase domain 364 646 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g0692 Dod-Chr8 8114583 8117293 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g0692 327 672 Receptor kinase-like Gene Family AT3G55950 75.630 1.16e-178 527
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Dod08g0692 Pkinase 3.1e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g0692 - - aip:107606655 656.751
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g0692 08 8114583 8117293 Dod04g0358 04 4700571 4703635 ECH
Dod08g0692 08 8114583 8117293 Dod08g0692 08 8114583 8117293 ECH