Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Dod08g0676 | ATGTCGACGAACCACGACTCTCACAAATTCGACTGGCACTTCGACACGGAGCTCGAAGACGAAACAATCGAGCTCCGAGGCAAGAAACTCTTCTTCGTCATCGCCCTCTTCGCCATTGTCCTCTTCACCACCGCGCTCTTCTTCTACGCGCGCTGGATCTGCCGCTCCCGCGGCCTCATACCAACAACCACGACATTCGCCTCATCGATCCACTTGCGCCACGTGCCTCCGCATCAGCAATCGGAGGGACTCGACGCCGCCGCGATCAAGAAGCTGCCGATTGTGCTGCACCAAGGAGCGCCGTCATCTCCGGCGGATCCGAACGGCGGAGGTGGAGGAGCGGCGTTGGCGGATTGCTGCATCTGCCTGAGCGCGTTCAGAGACGGAGAGAAACTGAAGGTTCTTCCGGTTTGCGAGCATTGGTTCCACTGCGAGTGCGTTGACAAGTGGCTCAGGAATCACTCGAGTTGCCCGCTATGTAGAGCTTCGCTGAAGCTCGATCCTAATTCCTTTCCGAAGCTTTTGATCCAAGAACCTCCACTTCGGATTAATGACCGATTCTGA | 564 | 0.5691 | MSTNHDSHKFDWHFDTELEDETIELRGKKLFFVIALFAIVLFTTALFFYARWICRSRGLIPTTTTFASSIHLRHVPPHQQSEGLDAAAIKKLPIVLHQGAPSSPADPNGGGGGAALADCCICLSAFRDGEKLKVLPVCEHWFHCECVDKWLRNHSSCPLCRASLKLDPNSFPKLLIQEPPLRINDRF* | 188 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Dod08g0676 | 187 | ProSiteProfiles | Zinc finger RING-type profile. | 119 | 161 | IPR001841 | - | |
Dod08g0676 | 187 | SUPERFAMILY | RING/U-box | 118 | 170 | - | - | |
Dod08g0676 | 187 | Pfam | Ring finger domain | 118 | 161 | IPR001841 | - | |
Dod08g0676 | 187 | SMART | ring_2 | 119 | 160 | IPR001841 | - | |
Dod08g0676 | 187 | PANTHER | RING-H2 FINGER PROTEIN ATL51-RELATED | 3 | 170 | IPR044675 | - | |
Dod08g0676 | 187 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 70 | 166 | IPR013083 | - | |
Dod08g0676 | 187 | PANTHER | RING-H2 FINGER PROTEIN ATL66 | 3 | 170 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Dod08g0676 | Dod-Chr8 | 7895176 | 7895739 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Dod08g0676 | 12 | 170 | C3H Transcription Factor Family | AT3G11110 | 38.037 | 9.40e-31 | 108 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Dod08g0676 | - | - | adu:107496923 | 251.136 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Dod04g0371 | 04 | 4898735 | 4899274 | Dod08g0676 | 08 | 7895176 | 7895739 | PCT |