Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g0673 ATGAACCGCCCCACGCGGGAAGACTGTTGGAGCGACGGCGCCACCGAGACGTTAATCGATTCCTGGGGCGACCGTTACGTCCGTCTCAACCGCGGCCACCTTCGTCGGTCCGACTGGAAGGAAATCGCCGCTGCCGTTAACGGCCGTCAAGACGGCGTGAAGCCGCACAAGACGGACGTGCAGTGCAATAACAGGATCGACACGCTCAAGAAGAAGTACAAGGCGGAGGATTCCAAGCCCGTTCCTTCCAATTGGGCCTTCTACCACCGCCTTCACTCCCTTATCGGTGACAACAACAACAGCAGCAGCAGCAGCAGCAAGAAGCCCAACACCACAGTTGCTATAACTGTTAAGACGAGGCACGGGCCGGGCCGATGGCCCGCTGCGGAGAGGAAAAAGAGGGCTGAGGCGGTGATGGAGATTTCGGAGGAGGAGGGAGGTGCGGTGAGGGAGCTGGCGAGGGCGATTGTGAGGTTTGGGGAGATATATGAGAGGGTGGAGAGGTCGAAGCAGGAGCAGATGATGGAGTTGGAGAAGCAGAGGATGGAATTCGTTAGGGATCTTGAGCTCCAGAGGAGGAATGTGTTTGTGGATTCTCAGATGCAGGAGCAGAGAATGAAGCGCAGCAATTTGATCAATGGAAATGAATTGAGTAGTATTGCGTTTCTAAATTTCAGGCGTGAAGAAAAGTTGACTTGGTTTTAG 705 0.5489 MNRPTREDCWSDGATETLIDSWGDRYVRLNRGHLRRSDWKEIAAAVNGRQDGVKPHKTDVQCNNRIDTLKKKYKAEDSKPVPSNWAFYHRLHSLIGDNNNSSSSSSKKPNTTVAITVKTRHGPGRWPAAERKKRAEAVMEISEEEGGAVRELARAIVRFGEIYERVERSKQEQMMELEKQRMEFVRDLELQRRNVFVDSQMQEQRMKRSNLINGNELSSIAFLNFRREEKLTWF* 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g0673 234 Pfam Myb/SANT-like DNA-binding domain 7 94 IPR044822 -
Dod08g0673 234 Coils Coil 163 194 - -
Dod08g0673 234 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 5 211 IPR044823 -
Dod08g0673 234 PANTHER SEQUENCE-SPECIFIC DNA BINDING TRANSCRIPTION FACTOR 5 211 - -
Dod08g0673 234 Gene3D - 10 75 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g0673 Dod-Chr8 7839873 7841021 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g0673 127 208 Trihelix Transcription Factor Family AT3G14180 42.683 6.53e-15 71.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Dod08g0673 Myb_DNA-bind_4 5.2e-23 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g0673 - - qsu:112015545 248.825