Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g0672 ATGAAGGGCTACGAGCCACGTTCAAGCTCATCATGTGCAGCCTGCAAGTTCTTGAAGAGAAGGTGCATACCAAACTGCATATTCGCCCCGTACTTCCGCTCAGACGAGTGCAAGAAATTCGCCAAGGTTCACAAGGTGTTTGGTGCAAGCAATGTGAGCAAGATCCTCATTGAGGTGCCAGAAGAGCAGAGGGAGGACACCGTGAACTCGCTGGCTTACGAGGCAGAAGCAAGGCTAAGGGACCCGGTTTATGGTTGCATTGGTGCCATAGCACTGTTGCAAAGGAAGATGTTGGAGCTTCAACATGACCTTGCCATTGCTAAGGATCGCCTTGCTCGTTGTGCTGCTGCTGCTGCTGCTGTTGCTGCTTCTACTGCTATCACTACTTCTTCTTCTGCTGATATGTTTAATAATTCCCAAGTCAGCTTGCCACCTTTTCCTGGGTTTTCTACCTGCGGTGACTTCAGTGACAGCTTCTGCCACAGCTCTTCTTCATCTCAATCATTGAGCCGACATGAGACAACGGTTGATGATTTCATTCATATTCCATATATATTTTAA 561 0.4795 MKGYEPRSSSSCAACKFLKRRCIPNCIFAPYFRSDECKKFAKVHKVFGASNVSKILIEVPEEQREDTVNSLAYEAEARLRDPVYGCIGAIALLQRKMLELQHDLAIAKDRLARCAAAAAAVAASTAITTSSSADMFNNSQVSLPPFPGFSTCGDFSDSFCHSSSSSQSLSRHETTVDDFIHIPYIF* 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g0672 186 ProSiteProfiles LOB domain profile. 10 111 IPR004883 -
Dod08g0672 186 Coils Coil 90 110 - -
Dod08g0672 186 Pfam Lateral organ boundaries (LOB) domain 11 108 IPR004883 -
Dod08g0672 186 PANTHER LOB DOMAIN-CONTAINING PROTEIN 21 1 167 - -
Dod08g0672 186 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 1 167 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g0672 Dod-Chr8 7835504 7836353 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g0672 1 111 AS2 family AT3G11090 81.081 1.62e-64 194
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Dod08g0672 LOB 9.8e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g0672 - - aip:107608172 264.233
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g0672 08 7835504 7836353 Dod08g0672 08 7835504 7836353 ECH