Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g0647 ATGGACACTACTAGAGAGAAGAAGGACCAAGTAATTTTGCAACTTGGCATGAGAAATGCAGCGCATTGGCACCATGTTTTATGGAAGAGGACTAAGTGTAGAACCCACAACCCATGTCACCTTTTGTGGTGGTTTTTCTTCTGCTTGTGGTTTCTTCTGCTGCTGGTGAAGCCAGTGCTTGGTGAAGAGCGGTGGGATGGAGTGGTTGTGACACAGTCAAACTTCTTGGCACTCCAAGCATTCAAGCAGGAGCTGGTTGACCCAAAAGGGTTCTTGAGGAGCTGGAATGACAGTGGCTATGGAGCTTGTTCTGGTGGTTGGGTTGGAATCAAGTGTGCTCAAGGACAAGTCATTGTGATCCAGCTTCCATGGAAAGGTTTGAAGGGCCATATCACTGAAAGGATTGGCCAACTTCAAGGCCTTAGGAAGCTTAGTCTTCATGATAACCAAATTGAGGCTTCAGTCCCTTCAGCATTGGGACTCCTTCCCAATCTAAGAGGTGTTCAACTGTTCAACAACAGGTTAACTGGGTCCATACCTCCTTCTTTAGGTTCATGTCCTTTGCTTCAGTCTTTAGACCTCAGCAACAATTTGTTAAGTGGGGCAATCCCTGATAGCCTTGGGAATGCCACAAAGCTTTATTGGCTTAACTTGAGCTTCAATTCCTTCTCTGGTCCAATACCATCTAGCCTAACTAGCTTGCCTTCTTTGACTTTTCTTTCTTTTCAACACAATAATCTCTCTGGCTCTATTCCTAACTCATGGGGTGGTAGCTTCAAGAATGGACTCTTTAGGCTTCAAAATTTGATCCTAGATCATAACTTCTTGACTGGGAGCATTCCTGCTTCTTTGGGCAGACTAAGTGAACTCACAGAGATTTCTCTTGGCCATAACAAGTTTAGTGGGGAAATACCAAGTGAAATAGGAAGCCTTTCTAGGCTCAAGACAGTAGATTTTTCTAATAATGGATTGAGTGGAAGCTTGCCTGCCACTATCTCCAATTTATCCTCACTCGCTCTATTGAATGTAGAGAACAACCACCTTGGCAATCAAATACCAGAAGCTTTAGGCAGGTTACACAATCTTTCTGTTCTGGTTTTGAGTGGAAACCAATTTGTTGGCCACATTCCTCAAAGTATTGGAAACATTTCCACACTTACTCAGCTTGATGTGTCACTGAATAATATCAGTGGTGAAATTCCAGACTCATTTGAGAATCTAACTAGTCTTAACTCCTTCAATGTTTCTTATAATAACCTCTCTGGTCCTGTTCCCACCCGACTTGCTAAGAGATTTAACTCAAGCTCTTTTGTGGGAAACATTCAACTATGTGGCTACAGCCCTGCAACCCCATGTCCTTCACCAGCTCCTTCTGAAGGACAGGGAGTCATCACTCCAACTCCTGAAGCATCAAAACATCACCATCATAAACTAGGTACCAAAGACATAATTCTCATAGCAGCAGGAGTGCTCCTCATAGTCCTGGTGACAATTTGCTGCATCCTGCTATTCTGCCTGATCAGAAAAAGATCAACATCAAATGCAGAGCACGGCCAGAGAGCAGGGAGAGCTGCTGCTGCCACCAGGACAGAAAAAGGAGTCCCTGCAGCCGCCACCTCCTCCGGTGAAGTTGAGGCAGGTGGCGAGAATGGAGGGAAACTAGTCCATTTTGATGGACCACTGGCTTTTACAGCTGAGGCTCTCTTGTGTGCAACAGCAGAGATAATGGGAAAGAGCACCTATGGGACTGCATATAAGGCCACATTAGATGATGGAAGCCTAGCTGCAGTTAAAAGGTTAAGAGAAAAGATCACTAAAAGTCAGAGAGAATTTGAGTCAGAAGTTGCTGTCCTAGGGAGAATTCGACATCCAAATCTTTTGGCACTCAGAGCTTATTACTTGGGACCCAACAGAGAAAAGCTTCTTGTGTTTGACTACATGCCTAAAGGAAGTCTTGCTTCCTTCCTACATGATGCAGCTCGAGAGCCTGAAACAGTCATTGATTGGCCAACAAGGATGAAGATAGCGCAGGGAATGGCACGGGGCTTGTTCCACCTCCATTCCAATGAGAACATCATACATGGGAACCTCACATCCAGCAATGTCTTGCTTGATGAGAACACAAATGCCAAGATAGCAGACTATGGTCTTTCAAGGTTGATGACAAATGCTGCTAACACCAGTGTGATTGCAACTGCCAGCGCATTGGGGTACCGTGCGCCGGAGCTCTTGAAGCTGAAGAAGGCCAACACAAAAACTGATATATACAGCCTTGGTGTTATCTTGTTAGAACTCCTAACGGGCAAGCAGCCAGGCGAGGCTATGAGTGGTGTGGATCTACCTCAGTGGGTTGCCTCTGTTGTGAAAGAGGAGTGGACTAATGAGGTGTTTGATGTTGAGTTGATGAGGGATGCATCAACAAATGGGGATGAGTTGCTCAACACCTTGAAGCTTGCTTTGCACTGTGTTGATCCTACTCCATCAGCACGGCCAGAAGCTCACCAAGTGTTGCAGCAGCTAGAAGAGATTCGGCAAGAGGTAGTGTCAGCTAGCTCTGGTGATGATGGAGCCATCCCTTCCACCAGTGAATAA 2592 0.4556 MDTTREKKDQVILQLGMRNAAHWHHVLWKRTKCRTHNPCHLLWWFFFCLWFLLLLVKPVLGEERWDGVVVTQSNFLALQAFKQELVDPKGFLRSWNDSGYGACSGGWVGIKCAQGQVIVIQLPWKGLKGHITERIGQLQGLRKLSLHDNQIEASVPSALGLLPNLRGVQLFNNRLTGSIPPSLGSCPLLQSLDLSNNLLSGAIPDSLGNATKLYWLNLSFNSFSGPIPSSLTSLPSLTFLSFQHNNLSGSIPNSWGGSFKNGLFRLQNLILDHNFLTGSIPASLGRLSELTEISLGHNKFSGEIPSEIGSLSRLKTVDFSNNGLSGSLPATISNLSSLALLNVENNHLGNQIPEALGRLHNLSVLVLSGNQFVGHIPQSIGNISTLTQLDVSLNNISGEIPDSFENLTSLNSFNVSYNNLSGPVPTRLAKRFNSSSFVGNIQLCGYSPATPCPSPAPSEGQGVITPTPEASKHHHHKLGTKDIILIAAGVLLIVLVTICCILLFCLIRKRSTSNAEHGQRAGRAAAATRTEKGVPAAATSSGEVEAGGENGGKLVHFDGPLAFTAEALLCATAEIMGKSTYGTAYKATLDDGSLAAVKRLREKITKSQREFESEVAVLGRIRHPNLLALRAYYLGPNREKLLVFDYMPKGSLASFLHDAAREPETVIDWPTRMKIAQGMARGLFHLHSNENIIHGNLTSSNVLLDENTNAKIADYGLSRLMTNAANTSVIATASALGYRAPELLKLKKANTKTDIYSLGVILLELLTGKQPGEAMSGVDLPQWVASVVKEEWTNEVFDVELMRDASTNGDELLNTLKLALHCVDPTPSARPEAHQVLQQLEEIRQEVVSASSGDDGAIPSTSE* 864
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g0647 863 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 39 856 - -
Dod08g0647 863 SUPERFAMILY Protein kinase-like (PK-like) 574 841 IPR011009 -
Dod08g0647 863 ProSiteProfiles Protein kinase domain profile. 570 848 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod08g0647 863 Gene3D Ribonuclease Inhibitor 71 220 IPR032675 -
Dod08g0647 863 Gene3D Ribonuclease Inhibitor 221 321 IPR032675 -
Dod08g0647 863 Gene3D Transferase(Phosphotransferase) domain 1 647 856 - -
Dod08g0647 863 CDD STKc_IRAK 576 843 - -
Dod08g0647 863 Pfam Leucine rich repeat 361 420 IPR001611 GO:0005515
Dod08g0647 863 Pfam Leucine rich repeat 188 247 IPR001611 GO:0005515
Dod08g0647 863 MobiDBLite consensus disorder prediction 516 549 - -
Dod08g0647 863 SUPERFAMILY L domain-like 111 447 - -
Dod08g0647 863 Pfam Leucine rich repeat N-terminal domain 76 112 IPR013210 -
Dod08g0647 863 SMART LRR_typ_2 138 161 IPR003591 -
Dod08g0647 863 SMART LRR_typ_2 335 359 IPR003591 -
Dod08g0647 863 SMART LRR_typ_2 162 186 IPR003591 -
Dod08g0647 863 SMART LRR_typ_2 187 210 IPR003591 -
Dod08g0647 863 SMART LRR_typ_2 234 257 IPR003591 -
Dod08g0647 863 SMART LRR_typ_2 263 287 IPR003591 -
Dod08g0647 863 SMART LRR_typ_2 311 334 IPR003591 -
Dod08g0647 863 Gene3D Phosphorylase Kinase; domain 1 553 646 - -
Dod08g0647 863 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 39 856 - -
Dod08g0647 863 Gene3D Ribonuclease Inhibitor 322 453 IPR032675 -
Dod08g0647 863 Pfam Protein tyrosine and serine/threonine kinase 574 840 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g0647 Dod-Chr8 7626055 7629425 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g0647 65 844 Receptor kinase-like Gene Family AT3G51740 63.555 0.0 937
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Dod08g0647 PK_Tyr_Ser-Thr 1e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g0647 - - gmx:100811174 1268.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g0647 08 7626055 7629425 Dod08g0647 08 7626055 7629425 ECH