Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g0632 ATGAAGCTCGACCCCAACACCACCACCACCACCCCACAAGATGTTACCACCCCTCTCCTACAAGACATCGAGGACTCACAAGATGATCATCGAAATTCCCAAGATGGGTCCATTTCGGGTGCAGTGTTCAACGTTTCAACCACCATGATTGGTGCCGGAATCATGTCGGTTCCGGCAACCTTGAAGGTGCTTGGGATAGTTCCGGGGTTCGTCGTGATCGTGTTGGTGGCACTTATAACAGATGTCACGGTTGAGTTCATGTTAAGGTACACGAGGTGTGGCAAATCTATTACCTATGCCGGCATGGTTGGTGAGTCTTTTGGGTACCTAGGATCCCTTGCTGTCAAGATTTGTGTCATCATAACAAATCTCGGTGTCCTTATCATCTACTTCATTATTCTTGGAGACGTGCTGTGTGGAAATGAATCCAAAGGAACCACACATTTGGGGATTCTGCAAGAATGGTTTGGCATCCACTGGTGGACCTCTCGCGCTTTTGCTCTTCTTATAGCTGCTCTCTTCATCATGCTCCCACTCCTTATGTTACGCCGCGTTGATTCACTCAGGTATAGTTCAGCAATATCAATCCTGCTAGCATTGGTCTTTGTTGCAATTTGCTCCTCGATGGCGTTTTATGCATTATGGTCCGGCAAAACTCACCCTCTGAGGATTGTTCCTGATTTCTCTCAAGTCTCTGTCCTTGACCTTTTCACCACCGTCCCAATCTTTGTCACCGCTTTCGGATTCCATGTTAATGTTCATCCAATTAGAGCAGAGCTTGGGAAACCTTCCGACATGAGTTTGGCTGTGCGGATTTCCTTGATAATATGCGTGGCCATTTACTTTGCTATTGGCTTCTTTGGGTACCTATTGTTTGGGGACTCCATCATGCCCGATATGCTAGTAAACTTTGACCAAAATTCCAACACAAGGGCTGGTCGATTGCTCAATGACATTGTTCGGTTAAGCTATGCACTCCACCTTGCCCTTGTGTTCCCCATCATGAACTATTCCTTGAGGGCCAACATAGATGAACTCGTATTCTCAAAGAGAAACAAGCCTCCCCTTGCATTGGACACCCTAAGATTTGTGTCCCTCACTCTTGCTTTACTTGCCTTCACATTCTTGGTGGCAGTGGCCATCCCAAACATATGGTATTTCTTTCAGTTCTTGGGATCCACAACCATTGTTTGCCTCTCATTCATCTTCCCTGCCTCAATCATTCTAAGGGATATGCATGGCATATCAACGACAAAAGACAAAGCCTTGGCAATAGTGGTGATTCTTTTGGCTGTAGGGACAAGCGGAATTGCTATATGGACAAACTTGTATGGTTCTGCAGCTACTGGCCAATCGTAA 1359 0.4621 MKLDPNTTTTTPQDVTTPLLQDIEDSQDDHRNSQDGSISGAVFNVSTTMIGAGIMSVPATLKVLGIVPGFVVIVLVALITDVTVEFMLRYTRCGKSITYAGMVGESFGYLGSLAVKICVIITNLGVLIIYFIILGDVLCGNESKGTTHLGILQEWFGIHWWTSRAFALLIAALFIMLPLLMLRRVDSLRYSSAISILLALVFVAICSSMAFYALWSGKTHPLRIVPDFSQVSVLDLFTTVPIFVTAFGFHVNVHPIRAELGKPSDMSLAVRISLIICVAIYFAIGFFGYLLFGDSIMPDMLVNFDQNSNTRAGRLLNDIVRLSYALHLALVFPIMNYSLRANIDELVFSKRNKPPLALDTLRFVSLTLALLAFTFLVAVAIPNIWYFFQFLGSTTIVCLSFIFPASIILRDMHGISTTKDKALAIVVILLAVGTSGIAIWTNLYGSAATGQS* 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g0632 452 Pfam Transmembrane amino acid transporter protein 36 418 IPR013057 -
Dod08g0632 452 PANTHER AMINO ACID TRANSPORTER, TRANSMEMBRANE DOMAIN-CONTAINING PROTEIN-RELATED 13 447 - -
Dod08g0632 452 PANTHER AMINO ACID TRANSPORTER 13 447 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g0632 Dod-Chr8 7561325 7565646 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g0632 11 449 Amino Acid or Auxin Permease AAAP Family AT3G56200 55.000 6.46e-161 460
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g0632 - - ahf:112765408 711.064
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g0632 08 7561325 7565646 Dod08g0632 08 7561325 7565646 ECH
Dod04g0417 04 5475218 5477817 Dod08g0632 08 7561325 7565646 PCT