Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g0629 ATGGTATCTAGAGAGCAAAAGAGAGCAGCACTGCATGAGAAGCTGCAACTTCTTCGTTCTGTTACTAACTCCCATGCTCTGAACAAAACCTCGATCATAATCGATGCATCAAAGTATATTGAAGAGCTGAAACAAAAGGTGGACAGATTGAATCAAGAAATAGCCTCAGCAGAAACGTCAAATGACCACCATCCCCTGCCTATGGTTACAGTAGAAACACTAGAACAGGGATTCCTTATAAACGTCTATTCTACAAAAAGCTGCCAAGGTCTACTTGTTTCAATACTGGAGGCCTTTGAAGAGGTGGGGCTTACAGTGCTGGAAGCCAGGGTTTCTTGTACGGACACTTTTCAATTTCAAGCAGTTGGAGGAGATAATGAAGAACAAGGTGAGACTATTGATGCTCAAGCTGTGAAACAAGCAGTGGGGCGAGCAATAAAGAACTGGAGTCAAAGTGCTGATCAAGATTAA 471 0.4268 MVSREQKRAALHEKLQLLRSVTNSHALNKTSIIIDASKYIEELKQKVDRLNQEIASAETSNDHHPLPMVTVETLEQGFLINVYSTKSCQGLLVSILEAFEEVGLTVLEARVSCTDTFQFQAVGGDNEEQGETIDAQAVKQAVGRAIKNWSQSADQD* 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g0629 156 PANTHER TRANSCRIPTION FACTOR BHLH FAMILY-RELATED 2 155 - -
Dod08g0629 156 Gene3D - 3 70 IPR036638 GO:0046983
Dod08g0629 156 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 2 155 - -
Dod08g0629 156 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 6 68 IPR036638 GO:0046983
Dod08g0629 156 Coils Coil 33 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g0629 Dod-Chr8 7529280 7531247 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g0629 11 144 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G10570 28.767 1.43e-10 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g0629 - - gmx:100814138 251.521
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g0420 04 5551924 5554399 Dod08g0629 08 7529280 7531247 PCT