Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g0623 ATGTCTAGAGAAAGGGAGAGGTTTGATGAGATAGGCAAGAAGATCAAGAGGGAAGGAGATGTTTCTGCCCAAAAGGGAAGGAGACAAATGTTGGGCCCCCCTGGAACCCTAAATACCATTACCCCTTGTGCTGCATGTAAGCTCCTGCGAAGAAGATGTGCCCAAGAATGCCCCTTTTCTCCATATTTCTCTCCCCACGAGCCCCAAAAGTTTGCTTCTGTTCACAAAGTCTTTGGTGCCAGCAACGTCTCAAAGATGCTCATGGAGGTACCAGAGAATCAAAGAGCCGATGCTGCAAATAGTCTAGTTTATGAGGCTAATGTAAGGCTAAGAGACCCAGTTTATGGATGCATGGGTGCAATCTCTTCTTTGCAACAACAAGTCCAATCTCTAATAGCTGAACTTAATGCTGTGAGAGCAGAAATTCTCAAGTACAAACTCAGGGAAGCTAACATGGTACCTTCCTCTTCTCAAATAATGCTCCCTTCCACTGAGGTTGTATCAATTGCTGTTCCACCGCCACCACCACCTATCCTTCCCCCTCCTCTTCCTCCTACGAGTACTTCTTCCTCTTCTTCCATTATTTACACCCAACAGACAGATCCTTCCAATTATAGCACAATTTCAGGCGACAATGTTTCCTATTTTGGTTGA 654 0.4526 MSRERERFDEIGKKIKREGDVSAQKGRRQMLGPPGTLNTITPCAACKLLRRRCAQECPFSPYFSPHEPQKFASVHKVFGASNVSKMLMEVPENQRADAANSLVYEANVRLRDPVYGCMGAISSLQQQVQSLIAELNAVRAEILKYKLREANMVPSSSQIMLPSTEVVSIAVPPPPPPILPPPLPPTSTSSSSSIIYTQQTDPSNYSTISGDNVSYFG* 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g0623 217 MobiDBLite consensus disorder prediction 1 24 - -
Dod08g0623 217 Coils Coil 121 148 - -
Dod08g0623 217 MobiDBLite consensus disorder prediction 188 217 - -
Dod08g0623 217 MobiDBLite consensus disorder prediction 177 217 - -
Dod08g0623 217 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 26 217 - -
Dod08g0623 217 PANTHER LOB DOMAIN-CONTAINING PROTEIN 15 26 217 - -
Dod08g0623 217 ProSiteProfiles LOB domain profile. 41 142 IPR004883 -
Dod08g0623 217 MobiDBLite consensus disorder prediction 1 33 - -
Dod08g0623 217 Pfam Lateral organ boundaries (LOB) domain 42 138 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g0623 Dod-Chr8 7445541 7446939 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g0623 27 217 AS2 family AT2G40470 70.408 2.19e-76 227
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Dod08g0623 LOB 4.4e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g0623 - - gmx:100786324 320.857