Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g0601 ATGATGTTGTTCTTGAAGAAATGGAAGCTTTCTAGGAGTTTCTTGCTCAAAGCTCAGGTTGGGACTCCAAGAATGCAAGATCATGTAACAGTGGAAATTGGTGCTGAACATGGAGTAGAAAGAGGAGATGATGACAATAGCCACCAACAAATACCATTGCTGAGAAGGAGGGTGGTGGATGATGGATACAACTGGAGGAAATATGAAGAGAAACTGTTGAAAAGTAGTGGAACTCAGAGAAGTTACTACAGATGCACATACACAAGGTGCCCTGGGAAGAAAGAAGTTGAGAGAACTATGGATGGGGAGATTGTGGATATACTCTACAAGGGTACTCATACTCATGGCAAGCGTCTTGCTATAAAGTGGAACTCATCATCTGAATTACTTCCTTCACTTCTACCTTCAGAGCCTGAAATTCTAGATCAACCATTTGCCTCCAAAGAGGGTGGACAGTTGAATCATGATGAAGCACCAGAGAGCTCGTCAATATCAATTTGA 501 0.4212 MMLFLKKWKLSRSFLLKAQVGTPRMQDHVTVEIGAEHGVERGDDDNSHQQIPLLRRRVVDDGYNWRKYEEKLLKSSGTQRSYYRCTYTRCPGKKEVERTMDGEIVDILYKGTHTHGKRLAIKWNSSSELLPSLLPSEPEILDQPFASKEGGQLNHDEAPESSSISI* 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g0601 166 Pfam WRKY DNA -binding domain 60 115 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod08g0601 166 SUPERFAMILY WRKY DNA-binding domain 55 116 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dod08g0601 166 MobiDBLite consensus disorder prediction 140 166 - -
Dod08g0601 166 Gene3D WRKY domain 53 117 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dod08g0601 166 ProSiteProfiles WRKY domain profile. 58 118 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod08g0601 166 SMART WRKY_cls 59 117 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod08g0601 166 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 11 165 IPR044810 GO:0003700
Dod08g0601 166 PANTHER WRKY TRANSCRIPTION FACTOR WRKY24-LIKE 11 165 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g0601 Dod-Chr8 7110392 7111501 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g0601 58 164 WRKY Transcription Factor Family AT2G04880 35.185 2.62e-13 64.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Dod08g0601 WRKY 1.9e-20 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g0601 K13424 - gmx:102667674 142.895