Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g0595 ATGATTCCCCACATCCACCAAACCCGCTTCTTCCTCTTCCACCACCCTTCCACCATAAACCATAAACTACCACTTCAACCGCAAACCCCATTTTCTCTCCCTCTCAAAGTTCCAACCTTTCGAAATTCCAAGCCTACCCATGTCACTCTTTCTTCTTCTTCTTCTTCTGCTGTGAAGTCTCCTAAGCCTGCAAAACGAGTTTCACGCCTTGTGAAAACCGAAGCTCAACGAGTTCTCTTGGATTACCTCCACTTGACACGTGGCTACACCTTCTTGGATGCTGAGTACATCACCAAGAACTGCTCCAACTTCATTGAATCCTTGGCTTCTAAGGTTGTTTTTGTTGTTGGCCATGATGATGTTGCTTATTCGTTGAGGAAGTTCTTGAGGTACAACCCCATCAACGAGTTTGAACCCTTTTTTGAGAGTTTAGGAATTAGACCCTCTGAGTTGCACTTGTTTCTTCCACGTGGCATGTTCTTCTTGGATGATGATTCTGCTTTGGTTGATAATTTCCATGTTTTGTGTAACTATGGTGTGCCTAGGAACATGATGGGGAAGATTTATAAGGAAGCTAAGGAGGTTTTTGGTTACCCTAAAGGGTTGTTGTTGTCGAAATTTCAAGGTTATGAGGATTTGGGGTTGAGTAAATCTGTGATCATCAAGCTTGTTGTTTGTTGCCCTTCACTTTTGGTCTGTGATGGTGATGGTGGTGATGTCAATGGTGAGTTTGTGGCTGTTCTTGATTGGTTGAGGAGAATTGGGATTGAGGATGATTGGATTGTGAATTACATGTCTTGTTCAAGGACATATAGTTTGGGGAGAATGCTTGATACCATTCAATTTCTTGATAAGGTTGGATTTTCTGAGGAACGCATGCATAATTTGTTCAAGGCAAATCCTAAGTTGTTGTTGCAAGGTTTTGGGAAGAAGCTGCACTTGTTTTTGGTTAGATCACATGAGTTGGGGATCAAGGTAGATGTGATTTATGACTATTTCATGGAGTATCCCCATATGTTGACAAACAAGTTTGCGAAAAATCTGTTGAGGGTGGTTGATTTTTTGTGTTTTGTTGGGATGGGAACAGATGACATCGTGCAAATTTTGTCTAACCACATGCATCTCTTTAGCACACATTCCTTGAAAGGTCCTAAAACTGTTTGTTTGGAGTTAAAAGTTGAAAAAGCTGAGTTATGCCGAATCATAAAAGATGATCCGCTGAAACTTGTCAGTGTGGCTTCAAGAGTGGAACAGAAGAGCCCTGAACAGACATGTGGTCATGATCCACGCAAACATTTGGAGAAAACAACTTTCTTGATGAAAATGGGGTATGCAGAGAACTCTGAGGAGATGGCGAAGGCATTGAAAATGTTCCGAGGGAGAGGTGATCAGTTACAGGAAAGGTTTGATTGCCTGGTTGAAGCTGGTTTGGACTATAACAGTGTGCTTGAAATGATAAAAAGAACTCCTATGGTTCTAAACCAAAGGAAAGATGTCATTGAAAAGAAGATTGATTTCGTAAGAAACATTTTAGGCTACCCATTAGAGTGTGTCATTGGTTTCCCATCATACTTCTGTTATGATTTGGAGAAAATTATTCAAAGATTTTCAATGTATGCTTGGCTGAAGGAGAGGAAAGCAATAAATCCTTCGCTAACTTTGAGCACCATAGTTTCATCCAATGATAAACGGTTTGTAAAATATTTTGTGAATGTGCATCCTCAAGGTCCAACCATTTGGGAAAGTATAAAGAGGTTATCAAGTAAAGATAAGAACTAA 1779 0.4036 MIPHIHQTRFFLFHHPSTINHKLPLQPQTPFSLPLKVPTFRNSKPTHVTLSSSSSSAVKSPKPAKRVSRLVKTEAQRVLLDYLHLTRGYTFLDAEYITKNCSNFIESLASKVVFVVGHDDVAYSLRKFLRYNPINEFEPFFESLGIRPSELHLFLPRGMFFLDDDSALVDNFHVLCNYGVPRNMMGKIYKEAKEVFGYPKGLLLSKFQGYEDLGLSKSVIIKLVVCCPSLLVCDGDGGDVNGEFVAVLDWLRRIGIEDDWIVNYMSCSRTYSLGRMLDTIQFLDKVGFSEERMHNLFKANPKLLLQGFGKKLHLFLVRSHELGIKVDVIYDYFMEYPHMLTNKFAKNLLRVVDFLCFVGMGTDDIVQILSNHMHLFSTHSLKGPKTVCLELKVEKAELCRIIKDDPLKLVSVASRVEQKSPEQTCGHDPRKHLEKTTFLMKMGYAENSEEMAKALKMFRGRGDQLQERFDCLVEAGLDYNSVLEMIKRTPMVLNQRKDVIEKKIDFVRNILGYPLECVIGFPSYFCYDLEKIIQRFSMYAWLKERKAINPSLTLSTIVSSNDKRFVKYFVNVHPQGPTIWESIKRLSSKDKN* 593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g0595 592 Pfam mTERF 436 565 IPR003690 GO:0003690|GO:0006355
Dod08g0595 592 Pfam mTERF 280 415 IPR003690 GO:0003690|GO:0006355
Dod08g0595 592 Pfam mTERF 122 235 IPR003690 GO:0003690|GO:0006355
Dod08g0595 592 Gene3D Transcription termination factor 3, mitochondrial 126 239 IPR038538 -
Dod08g0595 592 Gene3D Transcription termination factor 3, mitochondrial 313 578 IPR038538 -
Dod08g0595 592 PANTHER MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 48 584 - -
Dod08g0595 592 PANTHER CGI-12 PROTEIN-RELATED 48 584 IPR003690 GO:0003690|GO:0006355
Dod08g0595 592 SMART mt_12 330 361 IPR003690 GO:0003690|GO:0006355
Dod08g0595 592 SMART mt_12 483 514 IPR003690 GO:0003690|GO:0006355
Dod08g0595 592 SMART mt_12 221 257 IPR003690 GO:0003690|GO:0006355
Dod08g0595 592 SMART mt_12 515 546 IPR003690 GO:0003690|GO:0006355
Dod08g0595 592 SMART mt_12 186 216 IPR003690 GO:0003690|GO:0006355
Dod08g0595 592 SMART mt_12 448 478 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g0595 Dod-Chr8 7051415 7053959 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Dod08g0595 mTERF 1.4e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g0595 - - lang:109340661 804.668