Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g0589 ATGCGTCGAGGCAGAGGAGCATCCACCGCAGCTGCAGCCGCAGCCGCAGCAGCAGCAGATCCGACCCCTGGAAACGCCGATTCAAGAAACCACGCCGGGGAAACGCGATTCCGCGGCGTTAGGAAGCGGCCATGGGGCCGATTCGCTGCAGAGATAAGGGATCCCTGGAAGAAGGCGCGCGTCTGGCTAGGCACCTTTGACTCCGCCGAGGACGCCGCCAGAGCCTACGACGCCGCCGCCAGATCCTTCCGAGGACCCAAGGCAAAGACCAATTTCCCCTTCTCCAGCAACGAAATCGGGATCTCACCCTCTCAGATTCCCCTCTATCACCACCACAATCGCAACGATTTCGACGATCCGGTTCACGGATTCGGGAAGTTCGAACCGGTTCACGTGAACCGCCCAACCAGCAGCGGCATGAGCAGCACCGTCGAATCGTTCAGCGGACCGAGGGTTCCGAGGATGGCTAGGATTGAATCGGTGCACCGCCGACGGAGACCGGAGAGACCGGTTCCTTCGGTCGTCGTCGCCGACGACGATTGCCACAGCGATTGCGATTCCTCGTCGTCCGTGATCGACGACGAGGACTGTGTCCTCACGTCGTCGTTCCGGAAAACCCTAAATTTCGATCTGAACCTTCCTCCACCGCTGCCGGCGGACGACGTCGGCGATTTCACCGCCGAGGAGATTCGCGCCACCACCTTGTGCCTCTGA 714 0.6134 MRRGRGASTAAAAAAAAAADPTPGNADSRNHAGETRFRGVRKRPWGRFAAEIRDPWKKARVWLGTFDSAEDAARAYDAAARSFRGPKAKTNFPFSSNEIGISPSQIPLYHHHNRNDFDDPVHGFGKFEPVHVNRPTSSGMSSTVESFSGPRVPRMARIESVHRRRRPERPVPSVVVADDDCHSDCDSSSSVIDDEDCVLTSSFRKTLNFDLNLPPPLPADDVGDFTAEEIRATTLCL* 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g0589 237 ProSiteProfiles AP2/ERF domain profile. 36 93 IPR001471 GO:0003700|GO:0006355
Dod08g0589 237 Pfam AP2 domain 35 85 IPR001471 GO:0003700|GO:0006355
Dod08g0589 237 Gene3D AP2/ERF domain 35 95 IPR036955 GO:0003700|GO:0006355
Dod08g0589 237 SMART rav1_2 36 99 IPR001471 GO:0003700|GO:0006355
Dod08g0589 237 PRINTS Ethylene responsive element binding protein signature 37 48 IPR001471 GO:0003700|GO:0006355
Dod08g0589 237 PRINTS Ethylene responsive element binding protein signature 59 75 IPR001471 GO:0003700|GO:0006355
Dod08g0589 237 MobiDBLite consensus disorder prediction 1 38 - -
Dod08g0589 237 CDD AP2 35 93 IPR001471 GO:0003700|GO:0006355
Dod08g0589 237 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 3-RELATED 1 203 - -
Dod08g0589 237 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 1 203 - -
Dod08g0589 237 SUPERFAMILY DNA-binding domain 36 95 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g0589 Dod-Chr8 6997819 6998903 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g0589 1 151 AP2-EREBP Transcription Factor Family AT1G50640 55.828 3.78e-41 139
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Dod08g0589 AP2 2.5e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g0589 K09286 - cpap:110808864 211.46