Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g0585 ATGCAAGTAGCAGAACAACTCCAAAAGGTTCAACACCAACACCACAACAACAGTCATCACAAGCAAAGGCATCACCAACAAGACACACAGATGTGCAGGAAGATCCAGCTCAGTGTCCCTGACCATGACCTCTCTCATCATCATCATTCAAAGGATGATGACGGTGTTGTTGTTGGTTGTGACGTTGATGGCTGTGAGAAGTTGCAGGAGGGTGAAGATCTCTTCATTCCACCTCTCAATTTTGCTATGGTGGATAATGGCATTTTCAGGTCTGGTTTCCCTGAACCTGCCAACTTCTCCTTCCTTCAGACCCTTGGCCTCCGCTCCATCATATATCTGTGTCCTGAGCCATATCCTGAGGCCAATATGGAGTTCCTCAAGTCAAACGGGATCAAGCTTTATCAGTTTGGGATTGAGGGTCATAAGGAGCCCTTTGTAAACATCCCAGAGGACACAATCCGTGAAGCACTAAAAGTTGTCCTTGATGTCAGGAACCACCCAGTTATAATTCATTGTAAGCGGGGCAAGCACCGAACAGGTTGCCTAGTAGGATGCTATAGGAAATTGCAAAAGTGGTGCTTATCATCTGTGTTTGATGAGTACCAGCGCTTTGCAGCTGCAAAAGCAAGAGTTTCAGATCAGAGGTTTGTCGAGTTGTTTGATGTTTCCAGCATGAAGCATGTGCCCATATTATTTTCATGTTTGAAGAGGGAAAAGGTGATGAACTCCTTCAATGCATTGCAGCGGCAAAGGACTAATTATTCTTCTCCATTTTCAGAATAA 783 0.4483 MQVAEQLQKVQHQHHNNSHHKQRHHQQDTQMCRKIQLSVPDHDLSHHHHSKDDDGVVVGCDVDGCEKLQEGEDLFIPPLNFAMVDNGIFRSGFPEPANFSFLQTLGLRSIIYLCPEPYPEANMEFLKSNGIKLYQFGIEGHKEPFVNIPEDTIREALKVVLDVRNHPVIIHCKRGKHRTGCLVGCYRKLQKWCLSSVFDEYQRFAAAKARVSDQRFVELFDVSSMKHVPILFSCLKREKVMNSFNALQRQRTNYSSPFSE* 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g0585 260 MobiDBLite consensus disorder prediction 1 30 - -
Dod08g0585 260 Pfam Tyrosine phosphatase family 76 227 IPR004861 -
Dod08g0585 260 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 76 221 IPR029021 -
Dod08g0585 260 ProSiteProfiles Dual specificity protein phosphatase domain profile. 80 231 IPR020422 GO:0006470|GO:0008138
Dod08g0585 260 CDD PFA-DSP_Siw14 74 221 - -
Dod08g0585 260 ProSitePatterns Tyrosine specific protein phosphatases active site. 170 180 IPR016130 GO:0016311|GO:0016791
Dod08g0585 260 PANTHER PHOSPHOTYROSINE PROTEIN PHOSPHATASES SUPERFAMILY PROTEIN ISOFORM 1 15 236 - -
Dod08g0585 260 PANTHER TYROSINE-PROTEIN PHOSPHATASE 15 236 - -
Dod08g0585 260 Gene3D Protein tyrosine phosphatase superfamily 74 224 IPR029021 -
Dod08g0585 260 PRINTS Plant and fungal dual specificity phosphatase signature 148 162 IPR020428 GO:0016791
Dod08g0585 260 PRINTS Plant and fungal dual specificity phosphatase signature 75 92 IPR020428 GO:0016791
Dod08g0585 260 PRINTS Plant and fungal dual specificity phosphatase signature 112 125 IPR020428 GO:0016791
Dod08g0585 260 PRINTS Plant and fungal dual specificity phosphatase signature 131 145 IPR020428 GO:0016791
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g0585 Dod-Chr8 6915293 6919605 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g0585 71 237 Protein tyrosine phosphatase (PTP) family AT4G03960 76.647 3.17e-99 286
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g0585 K18045 - gmx:100814279 358.221
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g0585 08 6915293 6919605 Dod08g0585 08 6915293 6919605 ECH