Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g0554 ATGGAACCCGAATCAAGATTATCATTTCTCTTCTTGTTGCTGGCTTTTATAATACCTTTTAATGCAGAATCAAAGTGTAGCAAGAGTTGTGACTTAGCTTTAGCTTCCTACTTTCTTTCGAATACTTCTAACCTGACATATATTTCAAATATTATGAAATCTTCGGTACTTTCCAAACCTGAGGATATTGTCAGCTACACAGAGACCATACAAAGCAAAGACTCAGTCCAGGCATTCACCAGAGTGAATGTTCCATTCCCTTGTGATTGCATCAATGATGAGTTTCTTGGCCACACATTCGAGTACTCGGTTGAGAAAGCTGACACCTACGAAAAGATTGCCACAACTGACTATGCCAACTTAGTCACTGCTGAGTGGTTGCAGAACACCAACAGTTATCAACCAAATAATATTCCTGATACTGGAACTCTTAATGTGACTGTTAACTGTTCCTGTGGGGACAGTGAAGTTAGCAAGGATTATGGCTTGTTCATCACATACCCTCTTAGACCTGAGGATTCTTTGCAGTCAATAGCCAACCAGACAAAGATTGAGCCAGAGTTGCTGCAGAAATACAACCCTGGTGTGAATTTCAGCAAAGGGAGTGGTCTTGTTTTTATTCCTGGGAAAGGTCTATCAGGTGGGGTTATTGCTGGAGTATCTGTTGGAGTAGTAGCAGGACTTCTGTTATTGGCATTTTGTGTTTATGTTAATTATTACCGCAGGAAGAAGGTATGGAAGAAAAAGTTGCTGGTACAAGATTCCAGTGGGAAAGAGCTAGCCAATGCCACAAACAACTTCAATCTGGCTAACAAAATTGGTCAAGGTGGTTTTGGGGAAGTCTATTATGCAGAACTGAATGGCGAGCAAGCCGCAATAAAAAAGATGGACATGAAAGCATCAAAAGAATTTCTTGCTGAACTGAAAGTGTTGACTCGCGTTCATCATTTGAACCTGGTACGCTTGATTGGATATTGTGTTAAGAGCTCTCTTTTCCTTGTCTATGAATATATTGAAAATGGAAACTTAAGGGAGCATCTACGTACGTCAGGTAGAGAACCTTTGCCGTGGTCTACCCGAGTTCAAATTGCTCTGGATTCAGCCAGGGGACTTGAATACATCCACGAGCATACACAGCCTGTATATATCCATCGCGACATAAAGTCAGAAAATATCTTATTAGATAAAAACTTCTGTGCAAAGGTTTCAGATTTTGGATTAACCAAGCTGATTGATGTTGGAAGTTCATCAGTTCCTACTGCAAACATGGCAGGCACATTTGGTTACATGCCTCCAGAATATGTGTATGGCAGTGTTTCTCCCAAAATAGATGTCTATGCTTTTGGAGTTGTCCTTTTTGAACTTATTTCTGCTAAAGAAGCTGTGATCAAGGGTGATGTATCTGGTGCTGAATTAAAGGGCCTAGTAGCTTTGTTTGATGAAGTTTTTGACCAGACAGATCCTAAAGAGGGTCTTAAAAAACTGGTGGATCCTAGGCTTGGAGATAATTACTCAATTGATTCAGTTCTTAAGATGGCACAACTTGCCAAGGCATGTACAGAGGGAGATCCACAAAGGCGTCCGAAAATGAGATCTGTTGTGGTTGCTCTTATGACACTTACTTCAACTACTGAGAATTGGGACATTGCTTCCTTCTATGAAAAACCAGCTCTTGTAAATCTAATGTCTGGAAGATAG 1698 0.4052 MEPESRLSFLFLLLAFIIPFNAESKCSKSCDLALASYFLSNTSNLTYISNIMKSSVLSKPEDIVSYTETIQSKDSVQAFTRVNVPFPCDCINDEFLGHTFEYSVEKADTYEKIATTDYANLVTAEWLQNTNSYQPNNIPDTGTLNVTVNCSCGDSEVSKDYGLFITYPLRPEDSLQSIANQTKIEPELLQKYNPGVNFSKGSGLVFIPGKGLSGGVIAGVSVGVVAGLLLLAFCVYVNYYRRKKVWKKKLLVQDSSGKELANATNNFNLANKIGQGGFGEVYYAELNGEQAAIKKMDMKASKEFLAELKVLTRVHHLNLVRLIGYCVKSSLFLVYEYIENGNLREHLRTSGREPLPWSTRVQIALDSARGLEYIHEHTQPVYIHRDIKSENILLDKNFCAKVSDFGLTKLIDVGSSSVPTANMAGTFGYMPPEYVYGSVSPKIDVYAFGVVLFELISAKEAVIKGDVSGAELKGLVALFDEVFDQTDPKEGLKKLVDPRLGDNYSIDSVLKMAQLAKACTEGDPQRRPKMRSVVVALMTLTSTTENWDIASFYEKPALVNLMSGR* 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g0554 565 SUPERFAMILY Protein kinase-like (PK-like) 252 537 IPR011009 -
Dod08g0554 565 ProSitePatterns Serine/Threonine protein kinases active-site signature. 382 394 IPR008271 GO:0004672|GO:0006468
Dod08g0554 565 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 6 256 IPR044812 GO:0019199|GO:0045087
Dod08g0554 565 CDD STKc_IRAK 273 534 - -
Dod08g0554 565 Gene3D Phosphorylase Kinase; domain 1 252 337 - -
Dod08g0554 565 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 256 565 IPR044812 GO:0019199|GO:0045087
Dod08g0554 565 Pfam Protein tyrosine and serine/threonine kinase 268 536 IPR001245 GO:0004672|GO:0006468
Dod08g0554 565 ProSitePatterns Protein kinases ATP-binding region signature. 273 295 IPR017441 GO:0005524
Dod08g0554 565 SMART serkin_6 267 539 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod08g0554 565 PANTHER LYSM RECEPTOR KINASE 1B 6 256 - -
Dod08g0554 565 PANTHER LYSM RECEPTOR KINASE 1B 256 565 - -
Dod08g0554 565 Gene3D Transferase(Phosphotransferase) domain 1 338 555 - -
Dod08g0554 565 ProSiteProfiles Protein kinase domain profile. 267 540 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g0554 Dod-Chr8 6302576 6307105 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g0554 12 565 Receptor kinase-like Gene Family AT3G21630 55.882 0.0 668
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Dod08g0554 PK_Tyr_Ser-Thr 3.8e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g0554 - K13429 mtr:MTR_5g086030 794.653
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g0554 08 6302576 6307105 Dod08g0554 08 6302576 6307105 ECH