Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g0553 ATGGGTTCATCTGAACACATTCCACACGAGCTTTTTATCCACAACCAGATGGAGCCAGGATTCAGATTATCACTTCTCTTGTTGCTGCTGGCTTTTATTATACCTTTCAATGCAGAATCAAAGTGTAGCAAGAGTTGTGGCTTAGCTTTAGCTTCCTACTATCTTGGGAACAGTTCTAACCTGACATATATTGTAAATATGATGAAATCTTCGGTTCTTTACAAACCTGAAGAAATTGTCAGCTACAACACAGACACCATACAAAGCAAAGACTCAGTCCAAGCATTCACCAGAGTGAACGTTCCATTCCCTTGTGGTTGCATCAATGGTGAGTTCCTTGGCTACACATTCCATTACTCAGTTGGGAGTAATGACATCTATGAAACCATTGCCGCAAATAACTATTCCAACTTGGTCACTGCTGAGTGGTTGCAGAACACCAACAGCTATCCACCAAATAATATTCCTGATGGTGGAATTCTTAATGTCACTGTCAAATGTTCCTGTGGAGACAGTGATGTTAGCAAGGATTATGGCTTGTTCATCACATATCCTCTTAGATCTGACGATACTTTGCAGTCAATTGCCAACCAGACAAAGCTTGAGCCTGAGTTGCTGCAGAAATATAACCCTGGTGTGGATTTCTTCCAAGGGAGTGCTGTGGTTTTTATTCCTGGGAAAGATGAAAATGGTAACTACGTGCCCTATCGCATAAGCAATGGAGGTCTATCAGGTGGGGTTATTGCTGGAGTGTCTGTTGGAATAGTAGCAGGACTTCTGTTATTGGCATTTTGTGTTTATGTTACGTATTACCGAAGGAAGAAGGTATGGAAGAAAAGATTGCTTGTAGAAGATTCCCGTGGGAAAGGTAAAGCCTCTGGTAATGCTGAATACGGAACTTCGGATTCTGGTGGTCCTGGTGCTGGAGGTGATACTAGCATCACAGGCATTAGGGTAGAAAAATCAGCAGAGTTTTCATATGAAGAACTAGCCAATGCAACAAACAACTTCAGTTCTGCTAACAAGATTGGTCAAGGTGGTTTTGGGGAAGTCTATTATGCAGAGCTCAATGGCGAGAAAGCTGCAATAAAAAAGATGGACATGAAAGCATCAAAAGAATTTCTTGCTGAACTAAAAGTGTTGACTCGTGTTCATCACTTAAACCTGGTACGCTTGATTGGATATTGTGCTAAGGGCTCTCTTTTCCTTGTCTACGAATATATTGACAATGGAAACTTAAGCCAGCATCTACGTAATTCAGAAAGAGAGCCGTTGCCATGGTCTACCCGGGTTCAAATTGCTCTGGATTCAGCCAGGGGACTTGAATACATTCATGAGCACACACAGCCTGTATATGTCCATCGCGACATAAAGTCAGAAAACATTTTATTAGACAAAAACTTCTGTGGAAAGGTTGCAGACTTTGGATTAACGAAGCTGATTGATGTTGGAAGTTCATCAGTCCCTACTGCTAATATGGCAGGCACATTTGGTTACATGCCACCAGAATATGTTGTGTATGGCGGTATTTCTCCCAAAATAGATGTCTATGCTTTTGGAGTTGTTCTTTATGAACTTATATCTGCTAAAGAAGCTGTGATCAAGGGTGGTGTATCTGGTGCTGAATCAAAGGGCCTGGTATCTTTGTTTCATGAAGTTTTTGACCGGCCAGATCCTAAAGAAGGTCTTAAAAAACTGGTGGATCCTAGGCTTGGAGATAATTACTCAATTGATTCAATCCTTAAGATGGCACAACTTGCCAAGGCATGTACAGAGGGAGATCCACAAAGGCGTCCGAAAATGAGATCTGTTGTGGTTGCTCTTTTGACACTTACTTCAACTACTGAGAATTGGGACATTGCTTCCTTCTATGAAAATCCAGCTCTTGTAAATCTAATGTCTGGAAGATAG 1911 0.4144 MGSSEHIPHELFIHNQMEPGFRLSLLLLLLAFIIPFNAESKCSKSCGLALASYYLGNSSNLTYIVNMMKSSVLYKPEEIVSYNTDTIQSKDSVQAFTRVNVPFPCGCINGEFLGYTFHYSVGSNDIYETIAANNYSNLVTAEWLQNTNSYPPNNIPDGGILNVTVKCSCGDSDVSKDYGLFITYPLRSDDTLQSIANQTKLEPELLQKYNPGVDFFQGSAVVFIPGKDENGNYVPYRISNGGLSGGVIAGVSVGIVAGLLLLAFCVYVTYYRRKKVWKKRLLVEDSRGKGKASGNAEYGTSDSGGPGAGGDTSITGIRVEKSAEFSYEELANATNNFSSANKIGQGGFGEVYYAELNGEKAAIKKMDMKASKEFLAELKVLTRVHHLNLVRLIGYCAKGSLFLVYEYIDNGNLSQHLRNSEREPLPWSTRVQIALDSARGLEYIHEHTQPVYVHRDIKSENILLDKNFCGKVADFGLTKLIDVGSSSVPTANMAGTFGYMPPEYVVYGGISPKIDVYAFGVVLYELISAKEAVIKGGVSGAESKGLVSLFHEVFDRPDPKEGLKKLVDPRLGDNYSIDSILKMAQLAKACTEGDPQRRPKMRSVVVALLTLTSTTENWDIASFYENPALVNLMSGR* 637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g0553 636 PANTHER LYSM RECEPTOR KINASE 1B 21 636 - -
Dod08g0553 636 Gene3D Transferase(Phosphotransferase) domain 1 408 625 - -
Dod08g0553 636 ProSiteProfiles Protein kinase domain profile. 337 611 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod08g0553 636 SUPERFAMILY Protein kinase-like (PK-like) 318 608 IPR011009 -
Dod08g0553 636 Pfam Protein tyrosine and serine/threonine kinase 340 606 IPR001245 GO:0004672|GO:0006468
Dod08g0553 636 ProSitePatterns Protein kinases ATP-binding region signature. 343 365 IPR017441 GO:0005524
Dod08g0553 636 Gene3D Phosphorylase Kinase; domain 1 311 407 - -
Dod08g0553 636 MobiDBLite consensus disorder prediction 288 311 - -
Dod08g0553 636 CDD STKc_IRAK 343 605 - -
Dod08g0553 636 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 21 636 IPR044812 GO:0019199|GO:0045087
Dod08g0553 636 ProSitePatterns Serine/Threonine protein kinases active-site signature. 452 464 IPR008271 GO:0004672|GO:0006468
Dod08g0553 636 SMART serkin_6 337 571 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g0553 Dod-Chr8 6290615 6295811 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g0553 21 636 Receptor kinase-like Gene Family AT3G21630 56.731 0.0 677
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Dod08g0553 PK_Tyr_Ser-Thr 4e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g0553 - K13429 mtr:MTR_5g086030 847.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g0977 04 28376235 28392593 Dod08g0553 08 6290615 6295811 PCT