Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g0518 ATGCACACATGTTTATCAACTTACAAGAACCTCTTCTTGTCTGAATTTTCAACGCCTGCCGTATTGGTTGTGGAAAGTGTAGGAGAGAATGTGACTGAGGTTGCAAAAGGAGATGTGGTTGTCCCAATTTTCTTGCCAGATTGTGGGGAGTGTATAGATTGCAAATCACCCAAGAGCAACCTTTGCACAAAATTTCCTTTCCAAGTTTCTCCATGGATGCCTAGAACTGCTACTTCTAGATTCACTGATATAAATGGAGAGATCATACACCATTTCCTGTTTGTTTCAAGTTTTAGTGAGTACACTGTGGTTGACATTGCCAATCTAACCAAGATTGATCCAGCTGTTCCTCCCAACAAGGCATGCCTCCTCAGTTGTGGTGTATCAACTGGGGTAGGTGCTGCTTGGAGAACAGCAAATGTGGAGCCAGAGTCAACTGTAGCCATTTTTGGGTTGGGATCCATTGGATTAGCTGTTGCTGAGGGAGCTAGACTTTGTGGAGCAACTAGGATTATAGGGAAAAAGTTTGGACTCACTGACTTTGTTAATGCGGGAGAATGTGGAGACAAATCTGTGAGCCAGGTTATTTTAGAGATGACTGGTGGGGGAGCAGATTATTGCTTTGAATGTGTTGGTATGGCATCATTGGTGCAAGAAGCATATGCTTCTTGCAGAAAGGGTTGGGGAAAAACAGTTGTTTTAGGAGTGGACAAGCCAGGATCCAAGTTGAGCCTCAGCTCCACTGAGGTCCTTGTTGGAGGGAAGTGCCTGATGGGATCCTTGTTTGGAGGACTCAAACCAAAATCTCATGTTCCCATTCTCCTTAAACGCTACACGGACAAGGAAACATATTCAAATGCAAGAAAGAGGGTTGTGGAAAGTGTAGGAACGGATGTAACTGAAGTTGCAAAAGGAGATGTAGTTGTCACAATTTTCTTGCCAGATTGTGGGGAGTGTATGGATTGCAAGTCACCCAAGAGCAACCTTTGTACAGATTTTCCTTTCAAAGTTTCTCATTGCATGCCTAGATATGCTACTTCTAGATTCACTGATCTTAATGGAGAGACCATACACCCTTTCCTGTTTGTTTCGAGTTTTAGCGAGTACACTGTGGTTGACATTGCCAACCTAACCAAGATTGATCCAGCTATTCCTCCCAACAGGGCATGCCTCCTCACTTGTGGTATATCAGCTGGGCTAGGTGCTGCTTGGAGATTAGCAAATGTTGAGCCAGGGTCAACTGTAGCTATTTTTGGGTTGGGATCCATTGGATTAGCAGTTGCTGAGGAAGCTAGACTTTGTGGAGCAACTAGGATTATAGGTGCGGATGTCAACCGGGAAAAATTTGAAATTGGTAATGCACTACTATTTAATAACCTCAGATCAACTCATCAAGAGTTATGTCAAATAATACAGATTATTTTAGAGATGACTGGTGGGGGAGCAGATTCTTGCTTTGAATGTGTTGGTATGGCATCATTGGTGCAAGAAGCATATGCTTCTTGTAGAAAGGGTTGGGGGAAAACAGTAGTTTTAGGAGTGGACAAGCCAGAATCCAGGTTGAGTCTTAATACTAGGGAGGTCCTTTTTAATGGGAAAAGCCTAATTGGATCCTTATTTGGAGGACTCAAACCCAAGACTCATGTGCCTATTCTCCTTAAGCGCTACATGGACAAGGTACGCTATGCAATTTCATATATTTTATTGGTTAGTCTTACTCCATGTCCCTTCTAA 1734 0.4302 MHTCLSTYKNLFLSEFSTPAVLVVESVGENVTEVAKGDVVVPIFLPDCGECIDCKSPKSNLCTKFPFQVSPWMPRTATSRFTDINGEIIHHFLFVSSFSEYTVVDIANLTKIDPAVPPNKACLLSCGVSTGVGAAWRTANVEPESTVAIFGLGSIGLAVAEGARLCGATRIIGKKFGLTDFVNAGECGDKSVSQVILEMTGGGADYCFECVGMASLVQEAYASCRKGWGKTVVLGVDKPGSKLSLSSTEVLVGGKCLMGSLFGGLKPKSHVPILLKRYTDKETYSNARKRVVESVGTDVTEVAKGDVVVTIFLPDCGECMDCKSPKSNLCTDFPFKVSHCMPRYATSRFTDLNGETIHPFLFVSSFSEYTVVDIANLTKIDPAIPPNRACLLTCGISAGLGAAWRLANVEPGSTVAIFGLGSIGLAVAEEARLCGATRIIGADVNREKFEIGNALLFNNLRSTHQELCQIIQIILEMTGGGADSCFECVGMASLVQEAYASCRKGWGKTVVLGVDKPESRLSLNTREVLFNGKSLIGSLFGGLKPKTHVPILLKRYMDKVRYAISYILLVSLTPCPF* 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g0518 577 PANTHER ALCOHOL DEHYDROGENASE-LIKE 7 291 560 - -
Dod08g0518 577 PANTHER ALCOHOL DEHYDROGENASE-LIKE 7 18 284 - -
Dod08g0518 577 Gene3D - 403 538 - -
Dod08g0518 577 Pfam Alcohol dehydrogenase GroES-like domain 23 111 IPR013154 -
Dod08g0518 577 Pfam Alcohol dehydrogenase GroES-like domain 291 379 IPR013154 -
Dod08g0518 577 Gene3D - 20 137 - -
Dod08g0518 577 PANTHER ALCOHOL DEHYDROGENASE 291 560 - -
Dod08g0518 577 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 384 558 IPR036291 -
Dod08g0518 577 SUPERFAMILY GroES-like 23 143 IPR011032 -
Dod08g0518 577 Pfam Zinc-binding dehydrogenase 156 264 IPR013149 -
Dod08g0518 577 Pfam Zinc-binding dehydrogenase 423 542 IPR013149 -
Dod08g0518 577 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 116 280 IPR036291 -
Dod08g0518 577 Gene3D - 138 257 - -
Dod08g0518 577 Gene3D - 291 402 - -
Dod08g0518 577 SUPERFAMILY GroES-like 291 418 IPR011032 -
Dod08g0518 577 PANTHER ALCOHOL DEHYDROGENASE 18 284 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g0518 Dod-Chr8 5814452 5822960 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g0518 K00121 - gmx:100788587 456.832
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g0937 04 25406161 25417602 Dod08g0518 08 5814452 5822960 PCT