Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g0512 ATGTTTCTTCAAATGAATTTGAAGATGGGAAGTGTGGTACATGTTGACTTAAGCAGCAACAAGTTTTCTGGAACACTGGATTTGGGACTTGGACATGACTCCTTTCTCTCATCAATTAAATATTTAAATGTTAGCCACAATTCCTTGACTGGTGAGCTATTTGCTCATGATGGTATTCCTTACCTTGACAATTTAGAGGTCTTCGATGCTAGTAATAATCAGTTAGTGGGGAATATACCTTCCTTCACATTTGTGGTGTCTCTGAGTATTCTTCGACTTGGATGCAATCAGTTGTCAGGTTCCCTACCAGAAGCTTTATTGAAAGAAAGTTCAATGATGTTGTCTGAACTAGATCTCAGTCAAAACAAGATTGAAGGTCCAATTGGAAGTATTACATCTGTCACTTTAAGGAAGCTTAATATGTCTTCAAACAAATTGTCGGGTGCCTTACCTCTCAAGGTAGGCCGTTGTGCCATCATAGATTTGAGTAATAACATGCTGTCAGGTAATGTGTCAAGGATCCAGTATTGGGGTAACTATGTGGAAGTTATTCAGCTAAGTTCAAACTCATTGACAGGAATGCTGCCAAATGAAACTTCTCAATTCTTAAGGCTAACAGCACTTAAGGTATCCAATAACTCATTGGAAGGCTTTCTCCCACCAGTCTTGGGAACATACCCAGAACTAGAAGAGATTGATCTTAGCCTCAACCAGTTTTCTGGGTTCCTCCTTCCAGGCTTTTTCACCTCAACCAAGTTGGCCAGTATTAACCTCTCGAACAATAAGTTTTCTGGATCAATTCCTATTCAACTCCAACAAGTTCCACATAATCCATTAGTTTCAGCTGAAAATTCTAGTCTGGTGTCTCTTGATCTTTCACACAACAACTTGAGCGGGGCAATACCTTCAAACCTAAGTAAGCTTCACAATTTGGCTTATCTCAATCTATGTAGCAACAAATTGGAAGGTGCTATTCCTAATGACCTTCCAGATGAATTGAGAGGATTCAATGTGTCCTTCAATAATCTTTCTGGTGTTGTACCAGACAACTTAATGCAATTTCCCGAATCAGCATTTCTTCCAGGAAATACTTTGTTGAGATTGCCAAAATCGCCATCATCACCAAAAGAAGCTCCCAACCCAGGTTTTAGAAAACACGAGTCACATAAAAAATCTACAATTAGGAGTGCCTTGATTGCAAGTTTGGTTACTGGTGCACTTGTGATGGCCTTTGTGGGTATAATGATTTATTATAGCATTCACCAGCACCAAGAAAGGACTTCTAAAGAAAATGGATCAAGAAGCATCATCCACGGGAGTGCTTCCATATCAACTAGAGAGGCACCTAACAGAAATTTGGAAGCACTACCATCTTCTGAGGAAGGGCCTGTTGATGATGTGAGAAGCATTCATGCAATAGCAAAGAAGCCAAAAGATCTTAGCCAACCTGAATTAGTTAAGAATGAGGAAGGAATGGCCTCTTCGATGTCTTTGTTGTCAGCTTCAAATCCTTCATCTTCTAAAAGCCATCAATTTGTGAATCCTGGTTCTTTCAGAGTATCCTCCCCTGATAAACTTGTTGGGGACTTGAATCTGTTTGATGGATCCTTGGTGCTAACTGCAGAAGAACTTTCATGTGCTCCAGCAGAACTTATTGGAAGGAGTTGTCATGGAACACTGTACAAAGCTACACTTGAATCTGGTCATGCATTGGCTGTCAAATGGTTAAGGGAAGGAATAACTAAAGGGAAAAAGGAGTTTGCAAGGGAACTAAGGAAACTTGGGACTATCAAGCATCCAAGTCTTGTTTCTATTCAGGGTTATTACTTTGGCCCGAAGGAGCACGAGAGACTGATTATAACAAATTTCATGAATGCACAATCTTTGGACATTTTTCTCCATGAGGCAGATAAAAGAAATCTCCATCCTTTGTCTCTCGATGAAAGGCTCAGGGTGGCCATAGAAGTGGCGCAGTGTCTGCATTACCTACACAATGAGAAGGCCATACCTCATGGCAATCTCAAATCCACAAACATTCTACTAGAAACTCCAAACAGAAATGTCCTGCTCACTGATTACAGCCTGCATAGGATACTAACGGCTTCTGGCACCACCGAACAAGTCCTGAATGCCGGTGCTCTCGGTTATATGCCTCCTGAGTTTGCTAGATTAAGCAAACCATGCCCTTCCTTGAAGAGCGACGTCTATGCATTCGGTGTTGTCTTGTTAGAGCTTCTAACAGGAAGAAACTCAGGGGAAGTGGTTTCTGGTATTCCTGGGGTGGTTGACCTCACAGACTGGGTGAGGTTCTTAGCAGAAGGAAACCACTCTAGCCAGTGCTTTGATAGGTTCCTTGTGGACAAGCAAAGTGGGGAAAGGCCATCTAGAATTCTTGATGATATGCTAAATGTGGCTCTTAGATGTATCCTTCCAGCATCAGAGAGGCCTGACATGGTAACAGTTTTTGATGATCTTTCATCAATAAGGTAG 2490 0.4137 MFLQMNLKMGSVVHVDLSSNKFSGTLDLGLGHDSFLSSIKYLNVSHNSLTGELFAHDGIPYLDNLEVFDASNNQLVGNIPSFTFVVSLSILRLGCNQLSGSLPEALLKESSMMLSELDLSQNKIEGPIGSITSVTLRKLNMSSNKLSGALPLKVGRCAIIDLSNNMLSGNVSRIQYWGNYVEVIQLSSNSLTGMLPNETSQFLRLTALKVSNNSLEGFLPPVLGTYPELEEIDLSLNQFSGFLLPGFFTSTKLASINLSNNKFSGSIPIQLQQVPHNPLVSAENSSLVSLDLSHNNLSGAIPSNLSKLHNLAYLNLCSNKLEGAIPNDLPDELRGFNVSFNNLSGVVPDNLMQFPESAFLPGNTLLRLPKSPSSPKEAPNPGFRKHESHKKSTIRSALIASLVTGALVMAFVGIMIYYSIHQHQERTSKENGSRSIIHGSASISTREAPNRNLEALPSSEEGPVDDVRSIHAIAKKPKDLSQPELVKNEEGMASSMSLLSASNPSSSKSHQFVNPGSFRVSSPDKLVGDLNLFDGSLVLTAEELSCAPAELIGRSCHGTLYKATLESGHALAVKWLREGITKGKKEFARELRKLGTIKHPSLVSIQGYYFGPKEHERLIITNFMNAQSLDIFLHEADKRNLHPLSLDERLRVAIEVAQCLHYLHNEKAIPHGNLKSTNILLETPNRNVLLTDYSLHRILTASGTTEQVLNAGALGYMPPEFARLSKPCPSLKSDVYAFGVVLLELLTGRNSGEVVSGIPGVVDLTDWVRFLAEGNHSSQCFDRFLVDKQSGERPSRILDDMLNVALRCILPASERPDMVTVFDDLSSIR* 830
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g0512 829 SUPERFAMILY L domain-like 283 355 - -
Dod08g0512 829 Pfam Leucine Rich repeat 284 299 IPR001611 GO:0005515
Dod08g0512 829 Gene3D Transferase(Phosphotransferase) domain 1 625 829 - -
Dod08g0512 829 Gene3D Phosphorylase Kinase; domain 1 552 624 - -
Dod08g0512 829 PANTHER OS07G0626500 PROTEIN 7 828 - -
Dod08g0512 829 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN 7 828 - -
Dod08g0512 829 Pfam Protein tyrosine and serine/threonine kinase 551 821 IPR001245 GO:0004672|GO:0006468
Dod08g0512 829 SUPERFAMILY L domain-like 9 272 - -
Dod08g0512 829 ProSiteProfiles Protein kinase domain profile. 546 829 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod08g0512 829 MobiDBLite consensus disorder prediction 365 390 - -
Dod08g0512 829 MobiDBLite consensus disorder prediction 440 465 - -
Dod08g0512 829 SUPERFAMILY Protein kinase-like (PK-like) 550 825 IPR011009 -
Dod08g0512 829 Gene3D Ribonuclease Inhibitor 2 376 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g0512 Dod-Chr8 5755904 5760480 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g0512 204 829 Receptor kinase-like Gene Family AT1G48480 29.797 2.84e-61 217
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Dod08g0512 PK_Tyr_Ser-Thr 9.8e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g0512 - - ccaj:109792420 1272.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g0512 08 5755904 5760480 Dod08g0512 08 5755904 5760480 ECH