Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g0493 ATGAGTCAGCCTAAGATTAAGCGCCGCGTGGGTATATATGAGGTAGGGAGGACCATTGGTGAGGGAACATTTGCAAAGGTGAAGTTTGCAAGGAACTCCGAGACTGGGGATCCTGTGGCTCTCAAGATTCTTGACAAAGAGAAAGTTCTCAAGCACAAGATGGCTGAGCAGATCAGGCGGGAGATTGCTACCATGAAGTTAATCCAGCATCCAAATGTTGTTCGACTATATGAGGTCATGGGAAGCAAAACGAAAATATATATTGTCCTGGAGTTTGTGACTGGGGGAGAGCTCTTTGACAAAATTGTAAACCATGGACGGATGAGCGAAGATGAAGCACGTCGATATTTCCAGCAGCTGATAAATGCTGTTGATTATTGCCATAGTAGGGGGGTCTACCACAGAGACCTGAAGCCAGAAAATCTGCTATTAGATGCTTATGGGAACCTTAAAGTTTCTGATTTTGGGTTGAGTGCACTCTCCCAACAAGTTCGGGATGATGGACTTCTCCATACTACATGTGGAACTCCAAATTATGTCGCTCCTGAGGTCCTTAATGATAGAGGCTACGATGGGGCAACTGCAGACTTGTGGTCATGTGGGGTGATTCTCTTTGTGCTGGTTGCAGGATACTTGCCTTTTGATGACCCTAATCTTATGAACCTGTATAAAAAGATCTCAGCTGCTGAATTTACCTGCCCCCCATGGCTTTCTTTCAGTGCCAGGAAATTAATAACTCGAATCTTGGATCCCAATCCTGTGACTCGTATCACTATTGCTGAGATTTTGGGAGATGAATGGTTTAAGAAAGATTATAAGCCTCCGGTTTTCGAGGAGAAAGGGGAAACCAACCTTGATGATGTGGAAGCTGTCTTTAAAGATTCTGAAGAGCACCATGTGACTGAGAAGAAGGAAGAGCAGCCAACAGCCATGAATGCATTTGAGTTAATTTCCATGTCCAAAGGGCTGAACCTTGAAAACTTGTTTGATACAGGAGCAGGTCTACAGCTTCACGGATTTAAAAGGGAAACAAGATTCACATCAAAATCACCTGCTGATGAGATAATCAAGAAGATCGAAAAAGCTGCAAAACCTCTTGGCTTTGATGTGCAGAAGAAAAATTACAAGATGAGGCTTGAAAATGTGAAAGCTGGAAGGAAGGGAAACCTTAATGTTGCCACAGAGATATTCCAAGTGGCACCCTCTCTTCACATGGTTGAGGTACGGAAAGCAAAAGGTGATACATTGGAGTTCCATAAGTTCTACAAAAACCTTTCAACATGCCTGGAGGATGTTGTTTGGAAATCAGAAGATGATCTGCAAAAGCAGGAAACTAAGTGA 1341 0.4333 MSQPKIKRRVGIYEVGRTIGEGTFAKVKFARNSETGDPVALKILDKEKVLKHKMAEQIRREIATMKLIQHPNVVRLYEVMGSKTKIYIVLEFVTGGELFDKIVNHGRMSEDEARRYFQQLINAVDYCHSRGVYHRDLKPENLLLDAYGNLKVSDFGLSALSQQVRDDGLLHTTCGTPNYVAPEVLNDRGYDGATADLWSCGVILFVLVAGYLPFDDPNLMNLYKKISAAEFTCPPWLSFSARKLITRILDPNPVTRITIAEILGDEWFKKDYKPPVFEEKGETNLDDVEAVFKDSEEHHVTEKKEEQPTAMNAFELISMSKGLNLENLFDTGAGLQLHGFKRETRFTSKSPADEIIKKIEKAAKPLGFDVQKKNYKMRLENVKAGRKGNLNVATEIFQVAPSLHMVEVRKAKGDTLEFHKFYKNLSTCLEDVVWKSEDDLQKQETK* 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g0493 446 SMART serkin_6 13 268 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod08g0493 446 ProSiteProfiles Protein kinase domain profile. 13 268 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod08g0493 446 Pfam Protein kinase domain 13 268 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod08g0493 446 ProSitePatterns Serine/Threonine protein kinases active-site signature. 132 144 IPR008271 GO:0004672|GO:0006468
Dod08g0493 446 CDD STKc_SnRK3 13 267 - -
Dod08g0493 446 Gene3D Transferase(Phosphotransferase) domain 1 93 275 - -
Dod08g0493 446 ProSiteProfiles NAF domain profile. 306 330 IPR018451 GO:0007165
Dod08g0493 446 PANTHER CBL-INTERACTING SERINE/THREONINE-PROTEIN KINASE 3 2 437 - -
Dod08g0493 446 Gene3D Kinase associated domain 1, KA1 305 435 - -
Dod08g0493 446 SUPERFAMILY Protein kinase-like (PK-like) 11 289 IPR011009 -
Dod08g0493 446 Pfam NAF domain 308 372 IPR004041 GO:0007165
Dod08g0493 446 PANTHER - 2 437 - -
Dod08g0493 446 Gene3D Phosphorylase Kinase; domain 1 4 92 - -
Dod08g0493 446 ProSitePatterns Protein kinases ATP-binding region signature. 19 42 IPR017441 GO:0005524
Dod08g0493 446 CDD CIPK_C 312 426 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g0493 Dod-Chr8 5605081 5609990 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g0493 5 416 CBL-interacting serine-threonine protein kinases AT2G26980 80.097 0.0 693
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Dod08g0493 Pkinase 1.6e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g0493 - - gmx:100794566 821.617