Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g0492 ATGGCTTGTTTCCCAAGTTCAATTCTTGAGTTGAGAGAGCTGAACATGGGAAGTGAAAATCATTGGGGTATCAGGTCTCAAAGGGGAAAGCAGAATTCAAATTCCCAAGAACAAAAAGGCGTGTCGCAAGCTTCAGCATCTGATGTTGACAAATCCATCTCCAGTAGCCTTAAGTCTTTCACCTTCAGTGATCTAAAGGAAGCCACTAGGAACTTCCGGCGAGAAAATTTGATAGGCGAGGGAGGGTTTGGGTTTGTCTACAAGGGGTGGATAGATGAGAACACCTATGCTCCCACAAGACCTGGGACTGGGATTGTAGTGGCCATAAAGAAGCTTAAGCCAGAAAGCTTTCAAGGCCACAAGGAATGGCTGGCAGAAGTCTACTATCTAGGGCAGCTTCACCATGAAAATCTAGTAAAACTTATTGGTTATTGCTCAGATGGTAAAAACAGGCTTTTAGTTTATGAGTTTATGCAGAAAGGGAGTTTGGAAAATCATTTATTCAGAAAAGGTGTTGAACCGATACCATGGATTACACGGATCAATATTGCAATTGCTGTTGCAAGAGGATTGGCATTCTTACATTCACTTGATGCAAATATCATCTTTCGTGATTTGAAGGCTTCCAATGTCCTACTTGATTCGGATTTCAATGCAAAGATTTCAGATTTTGGCTTGGCAAGAGATGGTCCTACTGGAGATAACACTCATGTCTCAACCAGAGTTATTGGAACTCATGGTTATGCTGCACCAGAATATGTAGCTACAGGTCACTTGACCCCAAGGAGTGATGTATACAGCTTCGGCGTTGTCTTGTTAGAGTTGCTAACCGGAAGGCGCGTGGTTGAGGAAGAGAAACCTGGATTTTCGGACGAAACACTGGTGGATTGGGCAAGGCCATTCCTGAGTGATAGCAGAAGAATTTTGAGAATCATGGATAGCAGGTTAGGTGGTCAATACTCCAAGAAAGGAGCTCAAGCTGCAGCTGCCCTTGCTTTGCAGTGCTTGAATACTGATCCAAAGAATAGGCCAACTATGGTAAATGTTGTAGCAGCATTGGAAGCACTGAATTCCTCAAATTCAATCCCAAGGACCCCAAAACGTGTGGCTGAGAATAATGCAAACAAGCATTCTAGTCATTCCCAAAAGTCAGTTGGAAGTAGTGACAAACTATGA 1176 0.432 MACFPSSILELRELNMGSENHWGIRSQRGKQNSNSQEQKGVSQASASDVDKSISSSLKSFTFSDLKEATRNFRRENLIGEGGFGFVYKGWIDENTYAPTRPGTGIVVAIKKLKPESFQGHKEWLAEVYYLGQLHHENLVKLIGYCSDGKNRLLVYEFMQKGSLENHLFRKGVEPIPWITRINIAIAVARGLAFLHSLDANIIFRDLKASNVLLDSDFNAKISDFGLARDGPTGDNTHVSTRVIGTHGYAAPEYVATGHLTPRSDVYSFGVVLLELLTGRRVVEEEKPGFSDETLVDWARPFLSDSRRILRIMDSRLGGQYSKKGAQAAAALALQCLNTDPKNRPTMVNVVAALEALNSSNSIPRTPKRVAENNANKHSSHSQKSVGSSDKL* 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g0492 391 Pfam Protein kinase domain 73 350 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod08g0492 391 SUPERFAMILY Protein kinase-like (PK-like) 49 361 IPR011009 -
Dod08g0492 391 MobiDBLite consensus disorder prediction 361 391 - -
Dod08g0492 391 MobiDBLite consensus disorder prediction 23 47 - -
Dod08g0492 391 MobiDBLite consensus disorder prediction 375 391 - -
Dod08g0492 391 ProSitePatterns Protein kinases ATP-binding region signature. 78 111 IPR017441 GO:0005524
Dod08g0492 391 Gene3D Phosphorylase Kinase; domain 1 46 157 - -
Dod08g0492 391 CDD STKc_IRAK 78 356 - -
Dod08g0492 391 SMART serkin_6 72 356 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod08g0492 391 Gene3D Transferase(Phosphotransferase) domain 1 158 381 - -
Dod08g0492 391 PANTHER TYROSINE KINASE FAMILY PROTEIN 19 380 - -
Dod08g0492 391 PANTHER OS01G0588500 PROTEIN-RELATED 19 380 - -
Dod08g0492 391 ProSiteProfiles Protein kinase domain profile. 72 356 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g0492 Dod-Chr8 5566781 5569853 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g0492 1 363 Glycoside Hydrolase AT3G07070 45.623 1.92e-105 315
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Dod08g0492 Pkinase 1.9e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g0492 - - gmx:102664409 590.882