Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g0491 ATGGCGATCGCAGCTCCAGGGCAGCTGAACGTAAACGAATCCCCTTCGTGGGGATCCAGAAGCGTCGATTGCTTCGAGAAGCTTGAGCAAATTGGCGAGGGCACATATGGTCAAGTTTACATGGCTAAAGAGATCAAAACTGGTGAAATTGTTGCCCTGAAGAAAATACGAATGGACAACGAGAGAGAGGGGTTTCCTATAACTGCTATACGTGAAATCAAAATTCTAAAGAAACTACACCATGAAAATGTGATCAAGCTGAAAGAAATTGTGACTTCTCCAGGCCCTGAGAAAGATGAACAAGGAAGGCCAGATGGTAACAAATATAAAGGTGGCATCTATATGGTCTTTGAATACATGGACCATGATTTGACTGGTCTTGCTGACCGGCCTGGGATGAGATTTACTGTTCCTCAAATTAAGTGTTACATGAGACAGCTTTTGACGGGGCTTCACTACTGTCATGTAAATCAAGTGCTTCATCGTGATATCAAAGGTTCAAATCTCCTTATAGACAATGAAGGAAATCTGAAGCTTGCAGATTTTGGACTGGCACGGTCATTTTCTAATGACCACAATGCAAATCTTACAAATCGTGTCATTACATTATGGTACAGACCCCCTGAGTTGCTGCTAGGGACAACAAAGTACGGGCCAGCTGTAGATATGTGGTCTGTTGGATGCATTTTTGCTGAGCTTCTTCATGGAAAGCCTATCTTTCCTGGAAAAGATGAGCCTGAACAATTAAATAAAATATTTGAGCTATGTGGAGCACCAGATGAGGTGAACTGGCCTGGGGTTTCTAAGACTCCTTGGTATAATCAATTTAAGCCAACAAGGCCAATGAAAAGACGTCTGAGGGAAGTTTTCAGGCATTTTGATCGTCATGCTTTAGAATTGTTGGAGAGGATGTTGACACTTGATCCGGCTCAGAGAATTACGGCCAAGGATGCACTTGATGCTGAGTATTTTTGGACCGATCCATTGCCATGTGACCCCAAGAGTTTACCCAAGTACGAATCATCACATGAGTTTCAAACAAAGAAAAAGCGTCAGCAACAACGGCAAAATGAAGAAATGGCTAAGCGCCAGAAAATGCAACATCCGCAGCAGCACACTCGTCTTCCCCCCATTCAGCAGCCTGGACAACATGCCCAAATGCGGTCAGGGCCCAACCAACAAATTCATAGCTCTCAACCCCAAGTTGCTGCAGGACCTAGCCACCATTATGGTAAGCCTCGAGGTCCATCTGGTGGGCCAGGAAGATATCCTCCCAGTGGGAACCCTGGTGGAGGATACAATCACCCAAATCGTGGAGGTCAAGGAGGGGGTGGTTATGGCAGTGGGCCTTATCCTCCTCAAGGGCGAGGGGCACCTTATGGGTCCAGTGGTATGCCTGGCGGTGGTCCTCGTGGCGGAGGTGGTAGTGGCTATGGAGTTGGAGCTCCAACATATCCCCAACAAGGCGGTCCATATGGTGGGTCAACTGCTGGTCGTGGGTCAAACATGATGGGTGGAAACCGCAATCAACAATATGGCTGGCAGCAGTGA 1551 0.4681 MAIAAPGQLNVNESPSWGSRSVDCFEKLEQIGEGTYGQVYMAKEIKTGEIVALKKIRMDNEREGFPITAIREIKILKKLHHENVIKLKEIVTSPGPEKDEQGRPDGNKYKGGIYMVFEYMDHDLTGLADRPGMRFTVPQIKCYMRQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSNDHNANLTNRVITLWYRPPELLLGTTKYGPAVDMWSVGCIFAELLHGKPIFPGKDEPEQLNKIFELCGAPDEVNWPGVSKTPWYNQFKPTRPMKRRLREVFRHFDRHALELLERMLTLDPAQRITAKDALDAEYFWTDPLPCDPKSLPKYESSHEFQTKKKRQQQRQNEEMAKRQKMQHPQQHTRLPPIQQPGQHAQMRSGPNQQIHSSQPQVAAGPSHHYGKPRGPSGGPGRYPPSGNPGGGYNHPNRGGQGGGGYGSGPYPPQGRGAPYGSSGMPGGGPRGGGGSGYGVGAPTYPQQGGPYGGSTAGRGSNMMGGNRNQQYGWQQ* 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g0491 516 MobiDBLite consensus disorder prediction 489 516 - -
Dod08g0491 516 Gene3D Phosphorylase Kinase; domain 1 12 121 - -
Dod08g0491 516 Gene3D Transferase(Phosphotransferase) domain 1 122 364 - -
Dod08g0491 516 MobiDBLite consensus disorder prediction 335 516 - -
Dod08g0491 516 CDD STKc_CDK9_like 25 324 - -
Dod08g0491 516 MobiDBLite consensus disorder prediction 337 366 - -
Dod08g0491 516 ProSitePatterns Serine/Threonine protein kinases active-site signature. 159 171 IPR008271 GO:0004672|GO:0006468
Dod08g0491 516 SUPERFAMILY Protein kinase-like (PK-like) 19 332 IPR011009 -
Dod08g0491 516 ProSitePatterns Protein kinases ATP-binding region signature. 31 54 IPR017441 GO:0005524
Dod08g0491 516 MobiDBLite consensus disorder prediction 370 404 - -
Dod08g0491 516 SMART serkin_6 25 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod08g0491 516 PANTHER CELL DIVISION PROTEIN KINASE 5 453 - -
Dod08g0491 516 PANTHER CYCLIN-DEPENDENT KINASE C-2 5 453 - -
Dod08g0491 516 ProSiteProfiles Protein kinase domain profile. 25 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod08g0491 516 Pfam Protein kinase domain 25 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g0491 Dod-Chr8 5560658 5566176 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g0491 1 516 Core Cell Cycle Gene Families AT5G10270 78.927 0.0 797
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Dod08g0491 Pkinase 2.9e-74 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g0491 K08819 - gmx:100795971 871.307