Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g0477 ATGAGGAAAAAACTAGATACGCGTTTCCCTGCTGCTAGGATTAAGAAAATCATGCAAGCTGATGAGGATGTAGGGAAGATTGCTATGGCTGTGCCTCTTCTAGTTTCTAAAGCACTAGAACTATTTCTGCAAGATTTATGTGATCGGACATACGAGATAACTCTGAGAAGAGGAGCAAAGACCATGAATGCTTTTCATTTGAAGCAGTGTGTCCAGAGTTTTAACATCTTCGATTTTCTGAAAGATATTGTTGGCAAGGTTCCTGATTTAGGTGGTTCTGGTGCAACCAGTGACGATCGTTCTGTCACTAAGAGGAGGAAAGTTGCTGAAGACGATGATAATAACAGTGATGAGGATCAAAAGAGAAGTAAGATGCCAGAGCCTGGGCATACTGGTGGCAGAGGAAGGGGTAGAGGCAGAGGTAGAGGGCGTGGCCGGGGAAATAGAACAATAGATCATGAGATGACTTCACATGTCAAGTCTGAAGATGATTCTGATGTATTGAAGCAAAATAATATTAAGCATGCTCAAGGAAATGAGAGCATGGAGCATGAGTCAGAACCTGAAGAAGTTAAGCCTAATTTTCCAGTTAGCAAACTGGCTGAAGCATCTATTCGAAATTTCGACTTAAATTTGGACCCGGATGAGAACATGGATACATTAGACATACCAACTCCTGCCCCAGCTACATGTGCAAAATCATTGGTAGAAGAGAAGCATAAGGAATACCATGTGCCGACTACATCTGCAGAATCATTGGTAGAAGAGAAGCATGAGGAATACCCTGGATGGTCCTTGTCTGATATGGAAAAGATGACCATTGATCCCTTGCAGCTGGCCAACTTAAATAGAAGGACCGATGAAGACGAGGAGGATTATGATGAAGAAATATAG 894 0.4228 MRKKLDTRFPAARIKKIMQADEDVGKIAMAVPLLVSKALELFLQDLCDRTYEITLRRGAKTMNAFHLKQCVQSFNIFDFLKDIVGKVPDLGGSGATSDDRSVTKRRKVAEDDDNNSDEDQKRSKMPEPGHTGGRGRGRGRGRGRGRGNRTIDHEMTSHVKSEDDSDVLKQNNIKHAQGNESMEHESEPEEVKPNFPVSKLAEASIRNFDLNLDPDENMDTLDIPTPAPATCAKSLVEEKHKEYHVPTTSAESLVEEKHEEYPGWSLSDMEKMTIDPLQLANLNRRTDEDEEDYDEEI* 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g0477 297 MobiDBLite consensus disorder prediction 99 134 - -
Dod08g0477 297 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 8 71 IPR003958 -
Dod08g0477 297 SUPERFAMILY Histone-fold 18 88 IPR009072 GO:0046982
Dod08g0477 297 Gene3D Histone, subunit A 1 86 IPR009072 GO:0046982
Dod08g0477 297 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 1 296 - -
Dod08g0477 297 MobiDBLite consensus disorder prediction 145 168 - -
Dod08g0477 297 MobiDBLite consensus disorder prediction 90 168 - -
Dod08g0477 297 PANTHER HISTONE SUPERFAMILY PROTEIN 1 296 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g0477 Dod-Chr8 5454661 5457470 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g0477 1 129 CCAAT-HAP5 Transcription Factor Family AT3G12480 69.630 1.23e-60 193
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Dod08g0477 CBFD_NFYB_HMF 2.4e-18 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g0477 K21752 - gmx:100814800 397.512