Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g0466 ATGGCTTCTTCTAGAGCTGCTCCTGCCCCTGCTTTCGAACAACAACAGCATCCTAGAGGTGAGAACAAGCAAAAGAACGTGGCCGCAGAAGGAAGGAACAGAAGGGTACTCCAAGATATTGGTAATCTTGTGGCTAAGCAACCAGAACCTAATGTCTCCAAGCGCAACCCAAGGAACTTTGGTGCTCAATTGATTGGTCAAGCTGCAGTAGAGAAGAACAAGAAGCCAAGCACTGAACTTGTCAATGGAGCAGCAGTGGTACCAGCTGATGGGGTTGGTGTAGGGAAATTCATTGCTGCAACAAAGGTGGAACCAGCTAAGAAGCCAACAGCAGAACCTGAAGTTATTGTCATCAGCTCAGATGATGAATCTGAGGAGGCAGAAGAGGAGAAGAAGCCACAGGCTGTTATAGGGAGAAAGTTAAGAGAAAGGCCAACTAAGGAAAAAAATGCCAAGGCCTTCAGTTCAGTCCTCACAGCAAGAAGCAAGGCTGCTCTTGGACTTGCTTACAAGCCAAAGGATTCGGTAGTGAACATTGATGCAAATGACATTGACAATGAATTGGCTGCAGTGGAGTACCTTGATGACATATACCAGTTTTACAAACTTACTGAAGAGGACGGTCGTGTGCATGATTATATGGCTTCACAACCTGATATAAATACCAAGATGAGATCAATCCTTGTTGACTGGTTGATAGAAGTGCATCGAAAATTCGAGCTCATGCCGGAAACTCTTTACCTGACCCTGAATATTGTGGACCGGTTCCTGTCCATGAAGGCTGTGCCTAGAAGGGAACTTCAGTTGGTTGGTATCAGCTCAATGCTGATTGCATGCAAATATGAAGAGATATGGGCTCCAGAGGTTAATGATTTTGTGTGCATATCAGACAATGCCTATAATGGAGAACAGGTTCTGGTCATGGAGAAAACAATCTTGAGGAAGCTTGAATGGTATTTAACCGTTCCCACGCCGTATGTGTTTCTGGTTCGGTATATCAAAGCCTCTACTCCCTCTGATGATGAGATGGAGAATATGGTGTTTTTCCTCGCTGAACTTAGCACGTTGCATTATTCAACCATTATCATGTACTGCCCTTCTGTGATTGCTGCTTCTGCTGTGTATGCGGCAAGATGTACCCTTAAAAGGTTCCCTTTCTGGACTGAGACTCTTGAGCACTACACAGGCTACTCTGAGGAACAACTAAGGGATTGTGCCAAACTCATGGCCAACTTTCATGCTGCTGCACCAGAAAGTAAGCTTGGGGCAATTTACAAGAAATTCCGTAGCACAGATCGCAATGCAGTTGCTCTACTTGCTCCAGCAAAGAACTTGATAACACAATCTTGA 1350 0.4489 MASSRAAPAPAFEQQQHPRGENKQKNVAAEGRNRRVLQDIGNLVAKQPEPNVSKRNPRNFGAQLIGQAAVEKNKKPSTELVNGAAVVPADGVGVGKFIAATKVEPAKKPTAEPEVIVISSDDESEEAEEEKKPQAVIGRKLRERPTKEKNAKAFSSVLTARSKAALGLAYKPKDSVVNIDANDIDNELAAVEYLDDIYQFYKLTEEDGRVHDYMASQPDINTKMRSILVDWLIEVHRKFELMPETLYLTLNIVDRFLSMKAVPRRELQLVGISSMLIACKYEEIWAPEVNDFVCISDNAYNGEQVLVMEKTILRKLEWYLTVPTPYVFLVRYIKASTPSDDEMENMVFFLAELSTLHYSTIIMYCPSVIAASAVYAARCTLKRFPFWTETLEHYTGYSEEQLRDCAKLMANFHAAAPESKLGAIYKKFRSTDRNAVALLAPAKNLITQS* 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g0466 449 MobiDBLite consensus disorder prediction 129 143 - -
Dod08g0466 449 Gene3D - 210 321 - -
Dod08g0466 449 CDD CYCLIN 224 313 IPR013763 -
Dod08g0466 449 SUPERFAMILY Cyclin-like 185 320 IPR036915 -
Dod08g0466 449 CDD CYCLIN 321 409 IPR013763 -
Dod08g0466 449 Pfam Cyclin, N-terminal domain 196 320 IPR006671 -
Dod08g0466 449 SMART Cyclin_C_2 323 442 IPR004367 -
Dod08g0466 449 Pfam Cyclin, C-terminal domain 323 440 IPR004367 -
Dod08g0466 449 MobiDBLite consensus disorder prediction 1 58 - -
Dod08g0466 449 ProSitePatterns Cyclins signature. 225 256 IPR006671 -
Dod08g0466 449 SUPERFAMILY Cyclin-like 324 444 IPR036915 -
Dod08g0466 449 PANTHER CYCLIN-B1-4 26 444 - -
Dod08g0466 449 Gene3D - 196 437 - -
Dod08g0466 449 SMART cyclin_7 230 314 IPR013763 -
Dod08g0466 449 SMART cyclin_7 327 411 IPR013763 -
Dod08g0466 449 MobiDBLite consensus disorder prediction 120 143 - -
Dod08g0466 449 MobiDBLite consensus disorder prediction 18 32 - -
Dod08g0466 449 PIRSF Cyclin_A_B_D_E 1 449 IPR039361 -
Dod08g0466 449 PANTHER CYCLINS 26 444 IPR039361 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g0466 Dod-Chr8 5076418 5079686 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g0466 1 439 Core Cell Cycle Gene Families AT2G26760 51.364 6.39e-148 425
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g0466 K21777 - gmx:547782 602.053