Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g0456 ATGGCTTTCACACTAGACAGGTGTGAGGAGAGTATGATGTTCACTGTGGAGTCTCAGAAGTCAGTGCCTGCTCCCTTCCTGACAAAGACATACCAGCTTGTTGATGACCCTCGCACTGACCACATAGTGTCTTGGGGTGATGATGAAACCACATTTGTTGTGTGGAGGCCACCTGAGTTTGCCAGGGATCTTCTTCCAAACTATTTCAAGCACAACAACTTCTCAAGCTTTGTTAGGCAGCTCAATACTTACGGTTTCAAGAAGGTGGTTGCTGATAGGTGGGAGTTTGCAAATGAGTACTTCAGAAAAGGAGCAAAGCAACTTCTATGTGAAATCCACAGGAGAAAAACCTCTCAGCACCATCAACAACAATACCATGATCAACCACCACAGATTCTTCAGCCAGATGAGGGTCTATGTTGGATTGACACTACTCCACTATCTTCTCCTAAGTCAACTGGCACTGATATCTTAACAGCACTTTCTGAAGACAACCAAAGACTAAGGAGAAAGAACTTCATGCTCTTATCTGAACTCACTCACATGAAGAATCTTTACAATGACATAATATACTTCATCCAAAACCATGTAAAACCTGCTGCTCCCATTGAACAAAGAGGCAACAGTGCCAATATTCCAAAGCTTGTGGAGTTGGATTCATCATCACCTCATCATCAGTCTCCAAATGTTATTAGGCCACCAAAGGGTCGTATTATGGACAAGTCTTTGATGAGTTCTAGTGAGGAGTACAATAATAGTTCTGTTAAGCTCTTTGGGGTTCCCCTTAGTGGCAAAAAGAGGTTGCACCCAGATAACAACATTGTTCAACAAGAATAG 837 0.4265 MAFTLDRCEESMMFTVESQKSVPAPFLTKTYQLVDDPRTDHIVSWGDDETTFVVWRPPEFARDLLPNYFKHNNFSSFVRQLNTYGFKKVVADRWEFANEYFRKGAKQLLCEIHRRKTSQHHQQQYHDQPPQILQPDEGLCWIDTTPLSSPKSTGTDILTALSEDNQRLRRKNFMLLSELTHMKNLYNDIIYFIQNHVKPAAPIEQRGNSANIPKLVELDSSSPHHQSPNVIRPPKGRIMDKSLMSSSEEYNNSSVKLFGVPLSGKKRLHPDNNIVQQE* 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g0456 278 PRINTS Heat shock factor (HSF) domain signature 26 49 IPR000232 GO:0003700|GO:0006355|GO:0043565
Dod08g0456 278 PRINTS Heat shock factor (HSF) domain signature 64 76 IPR000232 GO:0003700|GO:0006355|GO:0043565
Dod08g0456 278 PRINTS Heat shock factor (HSF) domain signature 77 89 IPR000232 GO:0003700|GO:0006355|GO:0043565
Dod08g0456 278 ProSitePatterns HSF-type DNA-binding domain signature. 65 89 IPR000232 GO:0003700|GO:0006355|GO:0043565
Dod08g0456 278 MobiDBLite consensus disorder prediction 218 237 - -
Dod08g0456 278 PANTHER HEAT STRESS TRANSCRIPTION FACTOR B-4D 13 268 - -
Dod08g0456 278 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 13 268 IPR027725 -
Dod08g0456 278 Gene3D - 18 117 IPR036388 -
Dod08g0456 278 SUPERFAMILY "Winged helix" DNA-binding domain 23 115 IPR036390 -
Dod08g0456 278 Pfam HSF-type DNA-binding 26 115 IPR000232 GO:0003700|GO:0006355|GO:0043565
Dod08g0456 278 SMART hsfneu3 22 115 IPR000232 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g0456 Dod-Chr8 4964671 4966261 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g0456 10 269 HSF AT1G46264 52.903 5.13e-97 287
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Dod08g0456 HSF_DNA-bind 1.6e-32 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g0456 K09419 - gmx:100527682 439.113