LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Dod08g0451	ATGTTGAGAGTTTCTGTGTTACGCTCTTCAATGCCATTACCCCTTTCTTCTTCTTCTTCAACCTTCACTTCCTTCTTCTCTTCTTCTACTCCATCGTCATCTTCTTCTTATAATCCCAGTCCCAGGGTTGTCCCCAGAACCTACCACTTCCACCCTCCTTCACTCCCTTTTCCTTCCTTCACTCTCCCACCCTTGATGGGTCATCATCATCACCATCTTCCCAAGGCATCAGCTTCATATGGCACTGGGAGTGTTGCTGAAGGTGGTAGGGAGATACTGGTGCAGCATTTGCTGGTTAAAGAAGATGACCAGAAGCTGCTGTTGGATCTTCAGCAGAGAATCTCTGCAGGTGAAGATTTGAGTGATCTTGCTGTGGAATATTCAATTTGCCCATCCAAAGAAGAAGGAGGAATGCTTGGGTGGGTGAGAAAAGGGCAAATGGTTCCTGAATTTGAGGAGGCTGCATTTAGTGCTCCACTAAACAAAGTTGTAAGGTGCAAAACAAAATTTGGATGGCACTTGCTGCAGGTTTTATCTGAAAGGGAAGAATCAATACTTGAAGACATCCAACCTCAGGAGCTGCACAAGAAAATTCAAGATCCCAACTTTTTGGAGGAGGCACAATTAATTGATGTGCGAGAGCCGGAAGAAGTGGCAAAAGCATCTTTGCCAGGATTTAAGGTCCTTCCCCTCCGACAGTTTGGAAGCTGGGGGCCTGAAATAACTGCCACATTTGACCCTCAAAAAGATACATATGTTATGTGTCATCATGGCATGCGATCATTACATGTTGCCAAGTGGTTGCAGTCACAGGGTTTTAGGAAAGTATACAACATTTCTGGGGGAATTCATACCTATGCTGAGCAGGTTGATCCATCAGTCCCCACATACTGA	894	0.4519	MLRVSVLRSSMPLPLSSSSSTFTSFFSSSTPSSSSSYNPSPRVVPRTYHFHPPSLPFPSFTLPPLMGHHHHHLPKASASYGTGSVAEGGREILVQHLLVKEDDQKLLLDLQQRISAGEDLSDLAVEYSICPSKEEGGMLGWVRKGQMVPEFEEAAFSAPLNKVVRCKTKFGWHLLQVLSEREESILEDIQPQELHKKIQDPNFLEEAQLIDVREPEEVAKASLPGFKVLPLRQFGSWGPEITATFDPQKDTYVMCHHGMRSLHVAKWLQSQGFRKVYNISGGIHTYAEQVDPSVPTY*	298

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Dod08g0451	297	SMART	rhod_4	189	292	IPR001763	-
	Dod08g0451	297	ProSiteProfiles	Rhodanese domain profile.	203	295	IPR001763	-
	Dod08g0451	297	MobiDBLite	consensus disorder prediction	1	21	-	-
	Dod08g0451	297	Gene3D	-	183	294	IPR036873	-
	Dod08g0451	297	SUPERFAMILY	FKBP-like	89	178	-	-
	Dod08g0451	297	Pfam	PPIC-type PPIASE domain	100	179	-	-
	Dod08g0451	297	Pfam	Rhodanese-like domain	191	288	IPR001763	-
	Dod08g0451	297	Gene3D	-	87	182	IPR046357	GO:0003755
	Dod08g0451	297	ProSiteProfiles	PpiC-type peptidyl-prolyl cis-trans isomerase family profile.	89	179	IPR000297	GO:0003755
	Dod08g0451	297	PANTHER	PEPTIDYL-PROLYL CIS-TRANS ISOMERASE	2	297	-	-

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Dod08g0451	90	297	Sulfurtransferasese or Rhodanese	AT5G19370	67.308	3.26e-104	304

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Dod08g0451	-		-	ahf:112736689	429.869

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