Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g0441 ATGGCCAATAGTGATGATATCAAACCCTTTATCTCCCAAGTCTTTCAGATCTCTGATTCCGAATCTTCAGAACACCATAGCCCAGGGAGCTTCGCTACTCTCTCCAGTGGTGGCTCTGGGGATTCAGCTATCGGAAGCCCTGCCCCTGGTATGACGACGATGGTTGGCTACATCTCATCAAATCCCACAACCAACAGGAAAAACAAAAGACAATCCTCTGAGGTCGAAGGGTACATGCTTGTCTCTCGTGACCCTAGCAACAACCACAGTGCCCAACACAGTGACAACATGGTCACAACCCCAACACCAAAAAGGCCACGTGGTAGGCCACCTGGCTCCAAGAACAAGCCTAAGCCACCAATTGTCGTCAGGCAACAAAATGAACCAGCCATGAACCCTGTCCTCTTTGACATAATTCCCGGCACCGACGTCGTTGAGACCCTCATCAACTTTGCTCGTAGTCGGAATGCATGGATCTCTCTCCTGAGTGCGGTAGGTCCTGTCTCCGATGTGGTCATCAGCAGACCTGGGTCAAATGACCCAGGTCTCCCCATCCAGGGACCTGTCCACATGCTCGCCCTTACCGGCACCTACTTTGGTGGCCATTCTGTGCCACCAATCCCTCTTCCTCCTCCTCCTCTAGCTTCAAACCATCCTCCAAGCTCAACTTGGCCTTCATGTTCCTCTTTCTCAGCTCTTCTTTCTGGAGCTAATGGCCAAGTCTTTGGTGGGGTCGTTGGAGGGAAAATCCTCGCAGCAGGTGCTGTGAAGGTGATGGCTTCTTTGATCAGGAATCCCGAGATTCATAAGTCACACCTCACCAATGACAATGGTGGAGGAGACAATAATGGCGATGAAGGAGGGGATGGCAGTGGTAACGACACCTCATTTTCTAGTGCTGCGATCAATAATAGTGCTAAAGTTATTACTGCACCTGGTGGTGGCGGCGGCGGCAGCGGTGGCGGCAGCGGTTCTAGTGGTGCTGCTGTCCGCTACAACAAATGCAACTCTGGTGATGTGAACTGTAATGTCCTTCCTTACATATCTGCTGCTTATGGTGTTGTTGGTTCAGCCCCACTCATCAACTGTCACCTTTTCCCTGTTATTGCCGGTATTGGTGGCGCCCCTGGTGCTAATGTCTGCAATCTGAATGTGATGCAGTGGAGCCGCACGATATCGCATTGA 1185 0.5148 MANSDDIKPFISQVFQISDSESSEHHSPGSFATLSSGGSGDSAIGSPAPGMTTMVGYISSNPTTNRKNKRQSSEVEGYMLVSRDPSNNHSAQHSDNMVTTPTPKRPRGRPPGSKNKPKPPIVVRQQNEPAMNPVLFDIIPGTDVVETLINFARSRNAWISLLSAVGPVSDVVISRPGSNDPGLPIQGPVHMLALTGTYFGGHSVPPIPLPPPPLASNHPPSSTWPSCSSFSALLSGANGQVFGGVVGGKILAAGAVKVMASLIRNPEIHKSHLTNDNGGGDNNGDEGGDGSGNDTSFSSAAINNSAKVITAPGGGGGGSGGGSGSSGAAVRYNKCNSGDVNCNVLPYISAAYGVVGSAPLINCHLFPVIAGIGGAPGANVCNLNVMQWSRTISH* 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g0441 394 MobiDBLite consensus disorder prediction 83 101 - -
Dod08g0441 394 MobiDBLite consensus disorder prediction 1 121 - -
Dod08g0441 394 MobiDBLite consensus disorder prediction 1 42 - -
Dod08g0441 394 Pfam Plants and Prokaryotes Conserved (PCC) domain 133 261 IPR005175 -
Dod08g0441 394 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 70 308 - -
Dod08g0441 394 MobiDBLite consensus disorder prediction 53 68 - -
Dod08g0441 394 Gene3D - 133 277 - -
Dod08g0441 394 SUPERFAMILY AF0104/ALDC/Ptd012-like 130 272 - -
Dod08g0441 394 ProSiteProfiles PPC domain profile profile. 128 287 IPR005175 -
Dod08g0441 394 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 70 308 IPR014476 GO:0003680
Dod08g0441 394 MobiDBLite consensus disorder prediction 270 297 - -
Dod08g0441 394 CDD DUF296 132 198 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g0441 Dod-Chr8 4799316 4800789 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g0441 104 293 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 34.826 8.89e-31 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g0441 - - adu:107496595 182.956
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g0441 08 4799316 4800789 Dod08g0441 08 4799316 4800789 ECH