Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g0438 ATGATTGTGGCTTGTGGGCACTTGGTCCATTTTTCACATAATGCTTTGACATCAAAGTCAAAAGCTAGACCATTTCCTGTGAGATGTTACCTTAAATTGCCAGGTGCTATCATTCCCGGGAAAACTGGCATGGCCTCCATATATGTGTTTGCCATTGCCAAAGGGTTGTTCACATGGTGTTTCCATGCTAAGTCCGTGCAAGATCTTTACTTGTCAGCGTTAACTATTTACAATTCCCAGCTGGTAAAACATTTGCAAGATTACCTATGCAGAAATAACATTACAACAGCAGCATTTGAGAGCAAAGCAACGGCTTCGGCTTCGGCTTATTCAGACAACGTTGTTCCCTCTTCGGATCTCTCTCTCCCACTAATGTCTTCACTCCTCATCGACGATCTCCACGACCTTTCCCTCAAACCCCAGAGTGAAACAACAAGTGAATGTGAAGCTGAGATTCGTGGGGTGGAAGCTGGGAACCATGAGGGTGTGTGCGCCATTTGCTTGGACAAGATTGTGCTTCAGGAAACTGCTCTTGTAAAAGGTTGCGAGCATGCATACTGTGTGACATGCATCCTTCGCTGGGCTACATACAGCCAGAAAGTTACCTGCCCTCAGTGTAAACATCCATTCGAGTTCCTCTTTGTCCATCGCTCCCTTGATGGCAGGTAA 669 0.4589 MIVACGHLVHFSHNALTSKSKARPFPVRCYLKLPGAIIPGKTGMASIYVFAIAKGLFTWCFHAKSVQDLYLSALTIYNSQLVKHLQDYLCRNNITTAAFESKATASASAYSDNVVPSSDLSLPLMSSLLIDDLHDLSLKPQSETTSECEAEIRGVEAGNHEGVCAICLDKIVLQETALVKGCEHAYCVTCILRWATYSQKVTCPQCKHPFEFLFVHRSLDGR* 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g0438 222 Pfam Ring finger domain 164 207 IPR001841 -
Dod08g0438 222 PANTHER - 128 221 - -
Dod08g0438 222 ProSiteProfiles Zinc finger RING-type profile. 164 207 IPR001841 -
Dod08g0438 222 ProSitePatterns Zinc finger RING-type signature. 182 191 IPR017907 -
Dod08g0438 222 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 150 213 IPR013083 -
Dod08g0438 222 SUPERFAMILY RING/U-box 163 213 - -
Dod08g0438 222 SMART ring_2 164 206 IPR001841 -
Dod08g0438 222 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 128 221 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g0438 129 221 C3H Transcription Factor Family AT5G19430 60.215 3.13e-34 121
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g0438 - - lang:109360548 150.599