Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g0433 ATGGAAGAATCAGGTGAATTGCAATCAGAAGAAAATAAAGTCTATATGGACAAAAATAAAAAAAGAAGACTCAAAACACCTGCCCAGGTTATGGCCTTGGAGAAATTTTATAATGAGCACAAATATCCCACAGAGGAAATGAAAGTAGAACTTGCTGAGGAGTTAGGGTTGACAGAAAAGCAAATATCTGGTTGGTTTTGCCACAGGAGGTTAAAAGATAAAAGATTGTTGAAAGATGAAGCATTTGCTAATGGACGACAAGATCGTTCAAGTGGTGTCATCCAGGACCGTGGCAGTGGACTTGGGCAAGATTCATGTGGAAGCAGTAAACATGCTGATTACCGGTATCTGGATCCCAAAGAGGTAGAGAGCCATGGCCTCTACAATCATGATTTTTCAGCTGCAGATATGGCCTATGGACATAGGAACCAGTATACAGAAAATGATAGTGAAATGGATGATACATCATCTGAGAGTGGCTCATTTTTGCAAGAACGGTTGTTTCCTCAAGGCCAGGATCCATACGATATGGATGCTTCTAGGTATCTAACACCTAATGGAGCCCTTCCACCCCTTAATCCAAAGGGTGCACGTAACATGGGATACAAACCATCAGGATATTTGAAAGTTAAGGGTGAGATAGAACATGCTGCTATAACTGCTGTTAAGAAGCAATTAGGTAGGCATTATCTGGAAGATGGTCCGCTACTTGGTATAGAATTTGATTCACTTCCTCCAGGGGCATTTGAATGCCAAACTGCAGATCCAGTTCATGCAGAACCATACTCTATTACAAATCCTGCTCTTCCAAATTCTCCAGAAATCTCTGCTGTAAAAAGGCAACCCAAACTTAGCTCAAGATATGATTCGTATTATGGTAAATTTAGTTCCCAGGATTCACAGATGGAAGGGGCTGACTTTGGATCCTTGCATGACTCTGATTTCCAGGATAAGCAGGATAAGAAATCCCGCCAGAATATAAAACACAAGCAAAATATTTATAGTCATGCAAATCATTTTCCTGGCAGGAACTCTTCCCTGGATTTGTATGAAGACTCTAACGGAGAAGCATCTGCTTATAATAGCACTAAGAGTCATAGAATGGGCTACAAGCATGGTATTGAGGGGATGAGATCTGATTCTGCTTCTAACCATAGTGATCACTATGAAGAGAACCTTGCGGTCAAGCAGACAGACCTGTTGCGGCATGGCTATGATAACATCAATCCGAAAAATTTGCAAAGGAATGAACATGTAAAATCTAAGCCTACAAGTTCACTCCGTAATTCTCAAATTTCTGTGGATACTGAAGAAAGAGGGCTATCTTCTAGGGTTGCAAAGGAAGATATGGTTAAGGGGGACAGGAAGGCCAAAAAACAACATCATGGTGCAGATGGAGCAAGGATGCTTTCTAATGATCTCATGGTTGCAAAACGAGCTAAAGTCGATCTGCGTAAACACTACAATGTGAAACAAACACCAGTTGCCGAGATGGAACAAAGGAAAAATCAGAGATCTGGTGCAGAAATGCCAACTAGCTTTAGTGAGGACGAAACTGCTGAAACCAGTTCCTCACTGGATTAA 1584 0.4122 MEESGELQSEENKVYMDKNKKRRLKTPAQVMALEKFYNEHKYPTEEMKVELAEELGLTEKQISGWFCHRRLKDKRLLKDEAFANGRQDRSSGVIQDRGSGLGQDSCGSSKHADYRYLDPKEVESHGLYNHDFSAADMAYGHRNQYTENDSEMDDTSSESGSFLQERLFPQGQDPYDMDASRYLTPNGALPPLNPKGARNMGYKPSGYLKVKGEIEHAAITAVKKQLGRHYLEDGPLLGIEFDSLPPGAFECQTADPVHAEPYSITNPALPNSPEISAVKRQPKLSSRYDSYYGKFSSQDSQMEGADFGSLHDSDFQDKQDKKSRQNIKHKQNIYSHANHFPGRNSSLDLYEDSNGEASAYNSTKSHRMGYKHGIEGMRSDSASNHSDHYEENLAVKQTDLLRHGYDNINPKNLQRNEHVKSKPTSSLRNSQISVDTEERGLSSRVAKEDMVKGDRKAKKQHHGADGARMLSNDLMVAKRAKVDLRKHYNVKQTPVAEMEQRKNQRSGAEMPTSFSEDETAETSSSLD* 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g0433 527 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 1 527 - -
Dod08g0433 527 ProSiteProfiles 'Homeobox' domain profile. 16 76 IPR001356 GO:0003677
Dod08g0433 527 MobiDBLite consensus disorder prediction 423 438 - -
Dod08g0433 527 CDD homeodomain 20 75 IPR001356 GO:0003677
Dod08g0433 527 MobiDBLite consensus disorder prediction 86 112 - -
Dod08g0433 527 MobiDBLite consensus disorder prediction 440 466 - -
Dod08g0433 527 SMART HOX_1 18 80 IPR001356 GO:0003677
Dod08g0433 527 MobiDBLite consensus disorder prediction 418 467 - -
Dod08g0433 527 MobiDBLite consensus disorder prediction 496 527 - -
Dod08g0433 527 MobiDBLite consensus disorder prediction 7 21 - -
Dod08g0433 527 MobiDBLite consensus disorder prediction 1 21 - -
Dod08g0433 527 MobiDBLite consensus disorder prediction 490 527 - -
Dod08g0433 527 Pfam Homeodomain 20 75 IPR001356 GO:0003677
Dod08g0433 527 Gene3D - 9 92 - -
Dod08g0433 527 MobiDBLite consensus disorder prediction 302 329 - -
Dod08g0433 527 MobiDBLite consensus disorder prediction 88 106 - -
Dod08g0433 527 MobiDBLite consensus disorder prediction 310 327 - -
Dod08g0433 527 SUPERFAMILY Homeodomain-like 15 80 IPR009057 -
Dod08g0433 527 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 1 527 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g0433 Dod-Chr8 4704301 4710659 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g0433 3 527 Homeobox Transcription Factor Family AT4G03250 41.468 1.34e-89 282
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Dod08g0433 Homeodomain 2.8e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g0433 - - gmx:100803515 863.988
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g0433 08 4704301 4710659 Dod08g0433 08 4704301 4710659 ECH