Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Dod08g0432 | ATGTTACGCACTGATAGAATGGCTTCGGATCTTAGCAGAACCGGTGCTGTGGAACGAGACATTGAGCAGGCCATTACTGCCTTAAAGAAAGGGGCTTACTTGCTCAAGTATGGAAGAAGGGGAAAACCCAAGTTTTGCCCATTTCGGCTTTCCAATGATGAATCTGTTTTGATATGGTTCTCAGGGAAAGAAGAGAAGCACCTTAAACTGAGTCATGTCTCTAGAATTATATCTGGACAACGCACGCCTATCTTTCAAAGGTATCCACGACCTGAGAAGGAATACCAGTCATTTTCTCTTATCTACAATGATCGCTCACTGGACTTGATTTGCAAGGATAAAGATGAAGCTGAGGTTTGGTTTAGTGGTTTGAAAGCATTAATTTCACGTAGTCATCACCGGAAATGGAGGACAGAGTCAAGAAGTGAGGGTATTCCTTCTGAAGCTAATAGTCCTCGAACATACACCAGAAGAAGTTCTCCCTTGAATTCTCCATTTGGTAGTAATGAAAGTTTGCAAAAGGATAGTGGGGATCACCTTCGCCTTCACAGCCCTTATGAGAGCCCCCCCAAGAATGGTTTGGATAAAGCATTATCTGATGCAATGTTGTATGCTGTCCCTCCAAAGGGTTTCTTCCCTCCGGATTCTGCAAGTGCTTCAGTCCACTCTGTGTCATCTGGAGGATCAGATAGTATGCATGGTCACATGAAGATGATGGGTATGGATGCTTTTAGAGTCAGTCTATCAAGTGCTGTTAGCTCATCTAGCCAAGGTTCTGGTCATGATGATGGTGATGCTTTAGGGGATGTTTTCATTTGGGGGGAAGGCACGGGTGATGGTGTTTTGGGTGGTGGGACTCAGCGAGTTGGGAGTTGTATGGGTGTAAAAATGGATTCTCTTTTTCCAAAAGCCCTGGAATCTGCAGTAGTTCTTGATGTACAGAATATTGCTTGTGGTGGATGTCATGCAGCTTTAGTGACCAAACAAGGTGAAATTTTCTCTTGGGGGGAGGAATCAGGAGGTAGGCTTGGGCATGGTGTTGACTCTGATGTTCTCCATCCAAAGCTTATTGAAGCTTTAAGTAATACAAATATTGAACTTGTAGCTTGTGGGGAATATCATACATGTGCTGTGACACTTTCTGGTGATCTTTACACATGGGGTGATGGGACATACAATTATGGTCTTCTGGGGCATGGAAATCAAGTAAGCCACTGGGTCCCGAAAAGAGTAAATGGTCCCTTGGAGGGTATACATGTTTCATCTATTTCCTGTGGACCATGGCACACGGCTGTTGTAACCTCTGCTGGGCAATTATTTACTTTTGGTGACGGTACATTTGGTGTTCTGGGTCATGGAGACCGAAAAAGTGTTTCATTACCAAGGGAAGTAGACTCCCTCAAGGGTCTTCGTACTGTGCGGGCTGCTTGTGGTGTTTGGCATACTGCTGCGGTTGTGGAAGTCATGGTTGGAAATTCAAGTTCCAGCAACTGCTCTTCAGGGAAGCTGTTCACTTGGGGTGATGGAGACAAAGGTCGACTTGGGCATGGTGATAAGGAAGCAAAACTTGTTCCAACCTGTGTTGCAGCCCTAGTTGAACCCAATTTTTGTCAAGTTGCTTGTGGACATAGTTTGACTGTTGCACTAACCACTTCAGGCAATGTCTATACAATGGGTAGTCCCGTCTATGGCCAGTTAGGAAATCCTCAAGCCGATGGAAAGCTACCAACCCGGGTTGAAGGAAAGCTTTCAAAGAGTTTTGTGGAGGAGATTGCTTGTGGTGCATATCATGTTGCAGTGTTAACTTCAAGGACTGAAGTTTACACTTGGGGGAAGGGTGCAAATGGTCGTTTAGGCCATGGGGATACAGATGATAGAAATGCCCCAACATTAGTAGAAGCTTTGAAAGACAAACAAGTCAAAAGTGTTGCTTGTGGTACTAATTTCACTGCAGCTATCTGTCTGCATAAGTGGGTCTCTGGTGTTGACCAGTCTATGTGTTCTGGCTGTCGTCTGCCATTTAATTTCAAAAGAAAACGTCACAATTGTTATAATTGTGGACTTGTTTTTTGTCATTCATGTAGCTGTAAGAAGTCTCTTAAGGCTTCAATGGCACCAAACCCCAACAAACCTTATCGTGTCTGTGACAATTGTTTTAATAAACTAAGGAAAGCTACAGAAACTGATTCTTCATCTCATTCTTCTGTTAGCAGAAGAGGAAGCATCAATCCGGGGTCTCTTGAGTTAATTGATAAGGATGATAAATTGGATTCGAGATCTCGCAATCAACTTGCTAAGTTTTCTTCAATGGAGTCCTTGAAGCAAGTGGAAAGCAGATCTTCTAAGAAAAACAAGAAGTTGGAATTCAACAGTAGCCGAGTCTCACCTGTTCCAAATGGGGGTTCGCAATGGGGAGCACTGAGTATTTCTAAATCTTTTAATCCTGTTTTCGGATCATCAAAGAAGTTTTTCTCAGCCTCTGTTCCTGGATCTAGAATTGTTTCCCGAGCAACATCCCCAATATCTAGACGGCCTAGTCCACCGCGTTCAACTACTCCAACTCCAACACTGGGAGGTCTTACATCCCCAAAGATAGCTGTGGATGATGCTAAGAGGACCAATGATAGCCTCAGTCAGGAAGTTATTAAATTAAGATCACAGGTGGAAAACCTGACTCGGAAAGCCCAACTTCAAGAAGTTGAGTTGGAAAGAACAACTAAACAACTTAAAGATGCTATTGCAATAGCTGGGGAGGAAACTGCCAAATGCAAAGCAGCAAAGGAAGTGATCAAGTCCCTTACTGCCCAGTTGAAGGACATGGCTGAGAGGCTACCTGTAGGAGCAGCTAGGAATGTCAAATCACCTTCTCTTGCTTCCCTTGGTTCCATTCCTAGTTCCAATGAACTTAGCTATGCTTCTATTGATCGCTTGAATATTCAAGCAACAAGCCCTGAAGCAGACTTAACTGGACCAAATAATCAGTTACTTTCAAACGGATCAAGCACCACCAGCAACCGTAGTGCTGGTCACAATAAACAGAGCCAGTCAGATGCAACTAACAGAAATGGGAGCAGAACAAAGGACAGTGAATCCCGTGGTGAGACCGAATGGGTTGAGCAAGATGAACCTGGTGTATATATTACACTTACCTCCCTTCCTGGAGGTGTAATAGATCTCAAGAGAGTTCGCTTCAGGTATGAAATGCACCCTGATGATGTTTTTCTATCAACATACAGAACTTCATCTGTGAAATTTGGTAATGTAGGATACAATATACATGGTGTTAATGCCTTGTCAAGAATTGCTTCTCGGTCATTGATATGCTTTGATTCTAATAACAATTTAGGCTCCTTTTTAGGCCTTGAGACATTTTGA | 3375 | 0.4341 | MLRTDRMASDLSRTGAVERDIEQAITALKKGAYLLKYGRRGKPKFCPFRLSNDESVLIWFSGKEEKHLKLSHVSRIISGQRTPIFQRYPRPEKEYQSFSLIYNDRSLDLICKDKDEAEVWFSGLKALISRSHHRKWRTESRSEGIPSEANSPRTYTRRSSPLNSPFGSNESLQKDSGDHLRLHSPYESPPKNGLDKALSDAMLYAVPPKGFFPPDSASASVHSVSSGGSDSMHGHMKMMGMDAFRVSLSSAVSSSSQGSGHDDGDALGDVFIWGEGTGDGVLGGGTQRVGSCMGVKMDSLFPKALESAVVLDVQNIACGGCHAALVTKQGEIFSWGEESGGRLGHGVDSDVLHPKLIEALSNTNIELVACGEYHTCAVTLSGDLYTWGDGTYNYGLLGHGNQVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSLPREVDSLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCQVACGHSLTVALTTSGNVYTMGSPVYGQLGNPQADGKLPTRVEGKLSKSFVEEIACGAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNAPTLVEALKDKQVKSVACGTNFTAAICLHKWVSGVDQSMCSGCRLPFNFKRKRHNCYNCGLVFCHSCSCKKSLKASMAPNPNKPYRVCDNCFNKLRKATETDSSSHSSVSRRGSINPGSLELIDKDDKLDSRSRNQLAKFSSMESLKQVESRSSKKNKKLEFNSSRVSPVPNGGSQWGALSISKSFNPVFGSSKKFFSASVPGSRIVSRATSPISRRPSPPRSTTPTPTLGGLTSPKIAVDDAKRTNDSLSQEVIKLRSQVENLTRKAQLQEVELERTTKQLKDAIAIAGEETAKCKAAKEVIKSLTAQLKDMAERLPVGAARNVKSPSLASLGSIPSSNELSYASIDRLNIQATSPEADLTGPNNQLLSNGSSTTSNRSAGHNKQSQSDATNRNGSRTKDSESRGETEWVEQDEPGVYITLTSLPGGVIDLKRVRFRYEMHPDDVFLSTYRTSSVKFGNVGYNIHGVNALSRIASRSLICFDSNNNLGSFLGLETF* | 1125 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Dod08g0432 | 1124 | MobiDBLite | consensus disorder prediction | 143 | 173 | - | - | |
| Dod08g0432 | 1124 | ProSiteProfiles | Regulator of chromosome condensation (RCC1) repeat profile. | 605 | 656 | IPR000408 | - | |
| Dod08g0432 | 1124 | MobiDBLite | consensus disorder prediction | 983 | 1039 | - | - | |
| Dod08g0432 | 1124 | Pfam | Unstructured region between BRX_N and BRX domain | 959 | 1028 | - | - | |
| Dod08g0432 | 1124 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 669 | 730 | IPR013083 | - | |
| Dod08g0432 | 1124 | ProSiteProfiles | Regulator of chromosome condensation (RCC1) repeat profile. | 330 | 381 | IPR000408 | - | |
| Dod08g0432 | 1124 | Coils | Coil | 923 | 943 | - | - | |
| Dod08g0432 | 1124 | ProSiteProfiles | Regulator of chromosome condensation (RCC1) repeat profile. | 553 | 604 | IPR000408 | - | |
| Dod08g0432 | 1124 | ProSiteProfiles | Regulator of chromosome condensation (RCC1) repeat profile. | 382 | 436 | IPR000408 | - | |
| Dod08g0432 | 1124 | PANTHER | INACTIVE PHOSPHOLIPASE C-LIKE PROTEIN 2 | 21 | 1065 | - | - |
Showing 1 to 10 of 51 entries
Duplication type information
Functional genes information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Dod08g0432 | - | - | gmx:100806439 | 1861.66 |
Showing 1 to 1 of 1 entries
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Dod08g0432 | 08 | 4684834 | 4692955 | Dod08g0432 | 08 | 4684834 | 4692955 | ECH |
Showing 1 to 1 of 1 entries