Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g0424 ATGGCTGCTTCTGCTTTCAGGTTAGCACTCTATGGCCTCCTCCTTCTTTTGTGTCTCACTTTGCCTGCTTCAGTTTCTTCACTTCATCCACTTCCTATGTCTTTGAGAAGGCAGGCTTCAATCTTGGTCTCTCTCAAACAGCATTTTGAGGCCAACACTTCTTCACTTAACACCTGGAACATGTCTAACTACATGTCCCTTTGCACTTGGTATGGCATTCATTGTGACAACAACAACATGTCTGTGGTGTCACTAGACATATCCAACTTGAACGTTTCTGGGTCACTCTCACCTTCCATCACAGGTCTAAGGGGCCTTGTCAGTGTCTCAGTTGCTGGGAATGGATTCTCTGGGGAGTTTCCAGCTGATACTCACAAGCTATCAATGTTGAGATTCCTCAACATATCCAACAACATGTTCAGTGGAAGCTTGAGTTGGGACTTCTCGAAATTGAAGGAGCTAGAAGTGCTAGATGCTTATGACAACATGTTCAATGGATCACTCCCTCTTGGTGTCGTTGATCTTCCTAGGCTCAAGTACTTGAGTTTTGGTGGGAACTACTTCTCTGGGGGGATCCCTCCAAGCTATGGAAACATGTTGCAACTCAACTATCTGTCCCTTGCAGGAAATGATCTGAGAGGCTTCATACCAAGTGAGCTTGGGAATCTAACTAACCTGAACCAACTTTTCTTGGGGTATTACAACCAGTTTGATGGTCGAATACCACCTCATTTTGGTAAGCTCGTCAACTTGGTTCATTTGGACATTGCAAACTGTGGCTTGAAAGGTCCAATTCCAGCTGAGTTGGGAAGCCTCTACAAGTTAGACACTCTCTTCTTGCAAACTAATCAACTCACTGGCTCAATCCCTCCACAACTAGGCAATCTGAGTTGCTTGAAATCTCTTGATTTATCAAATAATGATCTAACAGGAGGCATCCCAGATGAGTTCTCAGGCCTTCATGAGCTTACCCTCTTGAACCTATTCATCAACAGGTTGCATGGTGAAATTCCACCCTTCATTGATGAGCTGCCTAAATTGGAAGTGTTGAAGCTTTGGCATAACAACTTCACTGGAGCCATTCCTTCAATGCTTGGCCAGAATGGTAAACTCATTGAGATTGACCTGTCAACAAATAAGCTCACTGGATTGGTGCCAAAATCCCTTTGCCTTGGAAGAAGGCTGAAGATTCTGATCTTGCTCGATAACTTTCTTTTTGGATCTTTGCCTGCTGATCTTGGACAATGCTACACACTCCAAAGAGTTCGTTTGGGACAGAACTATTTGACAGGATCAATACCGAATGGATTTCTGTACTTGCCTGAGCTATCCCTCTTGGAGCTACAGAACAATTATCTTAGTGGTTGGCTTCCACAAGAAACAAGCACTGCACCCTCCAAACTTGGACAGTTGAATCTATCAAACAACCGCTTATCTGGGACTCTTCCATCCTCAATCGGAAACTTCCCAAACTTGGAAATTCTGTTGCTCCATGGAAATAGATTCTCAGGAGAAATTCCTCCAGATATAGGGAGGTTGAAAAATATTCTCAAGTTGGATATGAGTGCTAACAACTTTTCAGGCAGTATTCCTCCAGAGATAGGTAACTGTGCCTTGCTCACCTGTTTAGATTTGAGTCAAAACCAATTATCTGGCCCTATCCCAGTCCAGGTTTCTCAAATTCACATACTAAACTATCTTAATGTTTCATGGAACCACTTGAACCAAAGTCTTCCCAAGGAACTTGGGGCATTGAAGGGCTTAGCTTCAGCAGATTTCTCTCACAATGACTTGTCTGGATCAATACCTGAGGTGGGACAATACTCAATGTTCAATTCCACATCCTTTGAGGGTAATCCTAGTCTCTGTGGATATGACTTGAATCCATGCAACCATTCTTCAACAGCAGTATTGGAATCACATGAAAAAAGCAGTGCTAAACCCGAAGTTTCTGGGAAGTATAAGCTTCTTTTTGCATTGGCATTGTTAGGTTGTTCATTGGTGTTTGCAACCTTAGCCTTTATCAAGAGCAGAAAGGCAAGGAGGCACTCCAATTCATGGAAGCTCACAGCATTTCAGAAGCTGGAATACGGAAGCGAAGACATCTTAGGGTGCATAAGGGAAAGCAATGTCATTGGAAGGGGAGGAGCTGGGGTAGTATATGGAGGAACCATGCCAAATGGAGAGCGAGTAGCTGTGAAGAAGCTACTGGGAATCAACAAAGGATGTTCTCATGATAATGGCCTATCTGCAGAAATAAGGACACTTGGTAGAATCAGGCACAGGTACATTGTAAGGTTGCTAGCATTCTGTTCAAATAGAGAGAGCAATTTGCTTGTTTATGAGTACATGCCAAATGGAAGCTTGGGTGAAGTCTTGCATGGGAAACGGGGTGAGTTTCTCAAGTGGGACACAAGACTGAAAATAGCCACAGAAGCTGCAAAAGGGCTTTGTTATTTGCACCATGACTGTTCCCCTCTGATAATCCATAGAGATGTCAAGTCAAACAACATATTATTGAACTCTGACTTTGAGGCTCATGTTGCTGATTTTGGGCTTGCCAAGTTCTTGCAAGACAATGGGGCATCAGAGTGCATGTCATCCATAGCTGGTTCTTATGGCTATATTGCTCCAGAGTATGCATACACATTGAAAATTGATGAGAAAAGTGATGTTTATAGCTTTGGAGTGGTGCTTCTTGAACTATTAACAGGGAGAAGGCCAGTAGGGGATTTTGGAGATGAAGGAGTAGACATTGTTCAATGGACCAAGCTTCAAACCAACTGGAGCAAAGAGAAGGTGGTGAAGGTCCTTGATGAGAGGCTGCATCACATTCCCTTGGATGAAGCAATGCAGGTGTTCTTTGTGGCCATGTTATGTGTTCAGGAACAAAGTGTGGAGCGACCAACCATGAGGGAAGTGGTTGAAATGCTTGCACAAGCAAAGCAACCAAACAGATTTCAAATCCAGTGA 2973 0.4346 MAASAFRLALYGLLLLLCLTLPASVSSLHPLPMSLRRQASILVSLKQHFEANTSSLNTWNMSNYMSLCTWYGIHCDNNNMSVVSLDISNLNVSGSLSPSITGLRGLVSVSVAGNGFSGEFPADTHKLSMLRFLNISNNMFSGSLSWDFSKLKELEVLDAYDNMFNGSLPLGVVDLPRLKYLSFGGNYFSGGIPPSYGNMLQLNYLSLAGNDLRGFIPSELGNLTNLNQLFLGYYNQFDGRIPPHFGKLVNLVHLDIANCGLKGPIPAELGSLYKLDTLFLQTNQLTGSIPPQLGNLSCLKSLDLSNNDLTGGIPDEFSGLHELTLLNLFINRLHGEIPPFIDELPKLEVLKLWHNNFTGAIPSMLGQNGKLIEIDLSTNKLTGLVPKSLCLGRRLKILILLDNFLFGSLPADLGQCYTLQRVRLGQNYLTGSIPNGFLYLPELSLLELQNNYLSGWLPQETSTAPSKLGQLNLSNNRLSGTLPSSIGNFPNLEILLLHGNRFSGEIPPDIGRLKNILKLDMSANNFSGSIPPEIGNCALLTCLDLSQNQLSGPIPVQVSQIHILNYLNVSWNHLNQSLPKELGALKGLASADFSHNDLSGSIPEVGQYSMFNSTSFEGNPSLCGYDLNPCNHSSTAVLESHEKSSAKPEVSGKYKLLFALALLGCSLVFATLAFIKSRKARRHSNSWKLTAFQKLEYGSEDILGCIRESNVIGRGGAGVVYGGTMPNGERVAVKKLLGINKGCSHDNGLSAEIRTLGRIRHRYIVRLLAFCSNRESNLLVYEYMPNGSLGEVLHGKRGEFLKWDTRLKIATEAAKGLCYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKFLQDNGASECMSSIAGSYGYIAPEYAYTLKIDEKSDVYSFGVVLLELLTGRRPVGDFGDEGVDIVQWTKLQTNWSKEKVVKVLDERLHHIPLDEAMQVFFVAMLCVQEQSVERPTMREVVEMLAQAKQPNRFQIQ* 991
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g0424 990 Pfam Leucine Rich Repeat 130 151 IPR001611 GO:0005515
Dod08g0424 990 Gene3D Transferase(Phosphotransferase) domain 1 784 989 - -
Dod08g0424 990 SUPERFAMILY L domain-like 370 630 - -
Dod08g0424 990 PANTHER UNNAMED PRODUCT 12 987 - -
Dod08g0424 990 SUPERFAMILY Protein kinase-like (PK-like) 700 978 IPR011009 -
Dod08g0424 990 Gene3D Phosphorylase Kinase; domain 1 677 783 - -
Dod08g0424 990 SMART LRR_typ_2 489 513 IPR003591 -
Dod08g0424 990 SMART LRR_typ_2 296 319 IPR003591 -
Dod08g0424 990 SMART LRR_typ_2 272 295 IPR003591 -
Dod08g0424 990 SMART LRR_typ_2 561 585 IPR003591 -
Dod08g0424 990 SMART LRR_typ_2 199 223 IPR003591 -
Dod08g0424 990 SMART LRR_typ_2 127 150 IPR003591 -
Dod08g0424 990 SMART LRR_typ_2 440 464 IPR003591 -
Dod08g0424 990 SMART LRR_typ_2 344 368 IPR003591 -
Dod08g0424 990 ProSiteProfiles Protein kinase domain profile. 706 986 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod08g0424 990 Gene3D Ribonuclease Inhibitor 37 145 IPR032675 -
Dod08g0424 990 SMART serkin_6 706 978 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod08g0424 990 Pfam Protein kinase domain 708 976 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod08g0424 990 Pfam Leucine rich repeat N-terminal domain 38 76 IPR013210 -
Dod08g0424 990 ProSitePatterns Serine/Threonine protein kinases active-site signature. 828 840 IPR008271 GO:0004672|GO:0006468
Dod08g0424 990 Gene3D Ribonuclease Inhibitor 340 637 IPR032675 -
Dod08g0424 990 Gene3D Ribonuclease Inhibitor 146 237 IPR032675 -
Dod08g0424 990 Gene3D Ribonuclease Inhibitor 238 339 IPR032675 -
Dod08g0424 990 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE BAM3 12 987 - -
Dod08g0424 990 SUPERFAMILY RNI-like 84 429 - -
Dod08g0424 990 Pfam Leucine rich repeat 274 333 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g0424 Dod-Chr8 4603012 4607761 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g0424 32 980 Receptor kinase-like Gene Family AT5G65700 58.342 0.0 1092
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Dod08g0424 Pkinase 2e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g0424 - - gmx:100816158 1676.76