Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g0404 ATGATTCCCAATTCTTTCATTTCAAGGTTAATTTCTCCCTTCAAAACCCCCAACAAACCCAAACGCCAATTCTCTCTTTCTATTCTTCTGCGAAACACAAACACCCATCTCATTTTCTTCAACTCATTCGCACCACAACGCCAAAAAGATCACAACTTTACAACCTCTTACCTCATCACTTCATTGGGGTTGTCCCCCGACACCGCCGCGCGCGTGTCCCAAAAGCTTCACCTCGAAAACCCCGACAAGCCAAACGCGGTCTTAACCCTCCTCAGAAACTACGGATTCTCCGAACCCCAGATCGCTAAATACGTCCAGAAACGACCCACGTTGCTCCTCACCAACGCCCAAAAGACCCTTTTGCCCAAACTCAAGTTCTTCACATCCATTGGGGTCTCACTCACTGACCTCCCAGAAATGGTGGTTAAGAACCAAACACTGCTTCATAGGAGCTTGAAAAATTGCCTCATTCCTCGCTATAATGCCCTCAAGAGTGTGGTTAGTGATGATGGTGTTGTTGTTAGAGCATTGAAACGTGATTCACGTTCATTCCTGTTCTGTGATGTGGTGAACAATTTGGTTCCCAACGTTGAGTTTTTGAAGCAATTTGGTGTTCCTCAAGGCTCAATCCCTCACTTGTTGGTGTCTCACCCTTACAGTGCTTTTATGAAGCATGAGAGGTTTGTTGAGGGTGTGAAGTTGGCTAAGGGAATGGGGTTTGATCCATTGAAGATAACTTTTGTGAATGCTGTTCATGTGTTGTTGAATTTGGATGAGGCGAAGATGGAATCAAGGATTGAGTCTTTGGAGAAGTGGGGTTGGTCTAGGGAGGTGACTCTTTCAGCATTTAGGAAGTCTCCTACTTTTATGTCGTGTTCGGAGGAGAGGATTGATAAAGCAATGAGTTTCTTGGTGGAGGATATGGGTTGGCCTTCAGCGGACATCGCTAGGTTCCCCACAACACTAATTTTTAGCTTGGAGAAGAGGATTGTCCCCAGATGCCATGTGATTAAGGTCTTGAAATCGAAAGGTCTCGTCAAGAGTCAGTTCACCTTGCCGTCGTTTGTGTGTGTGAGGGAGGAGGTTTTCTTGGAGAACTTTGTGAACAAGTTTCGGGATGAGATTCCTCTCCTAATGAAGGTATATCAAGGCTTGATTGATTATAAGGATGTGCTTTAG 1179 0.4521 MIPNSFISRLISPFKTPNKPKRQFSLSILLRNTNTHLIFFNSFAPQRQKDHNFTTSYLITSLGLSPDTAARVSQKLHLENPDKPNAVLTLLRNYGFSEPQIAKYVQKRPTLLLTNAQKTLLPKLKFFTSIGVSLTDLPEMVVKNQTLLHRSLKNCLIPRYNALKSVVSDDGVVVRALKRDSRSFLFCDVVNNLVPNVEFLKQFGVPQGSIPHLLVSHPYSAFMKHERFVEGVKLAKGMGFDPLKITFVNAVHVLLNLDEAKMESRIESLEKWGWSREVTLSAFRKSPTFMSCSEERIDKAMSFLVEDMGWPSADIARFPTTLIFSLEKRIVPRCHVIKVLKSKGLVKSQFTLPSFVCVREEVFLENFVNKFRDEIPLLMKVYQGLIDYKDVL* 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g0404 392 Pfam mTERF 253 363 IPR003690 GO:0003690|GO:0006355
Dod08g0404 392 Pfam mTERF 88 297 IPR003690 GO:0003690|GO:0006355
Dod08g0404 392 PANTHER CGI-12 PROTEIN-RELATED 36 385 IPR003690 GO:0003690|GO:0006355
Dod08g0404 392 Gene3D Transcription termination factor 3, mitochondrial 168 374 IPR038538 -
Dod08g0404 392 PANTHER MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 36 385 - -
Dod08g0404 392 SMART mt_12 174 206 IPR003690 GO:0003690|GO:0006355
Dod08g0404 392 SMART mt_12 280 311 IPR003690 GO:0003690|GO:0006355
Dod08g0404 392 SMART mt_12 245 275 IPR003690 GO:0003690|GO:0006355
Dod08g0404 392 SMART mt_12 138 169 IPR003690 GO:0003690|GO:0006355
Dod08g0404 392 SMART mt_12 102 133 IPR003690 GO:0003690|GO:0006355
Dod08g0404 392 SMART mt_12 312 346 IPR003690 GO:0003690|GO:0006355
Dod08g0404 392 SMART mt_12 211 241 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g0404 Dod-Chr8 4366920 4368624 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Dod08g0404 mTERF 2.6e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g0404 K15032 - gmx:100786641 357.451