Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g0402 ATGGATATTGCAAACGAAGCATCATCATCTTTGAGCTTTGTTTCATCTCAGTTATCAAATGGTGGTTGTTCAAGCAACTACAACATATCTTCCTCCACCAGCAATGAGAATGGGGAAAGTATTGAAATCAAGAGCTTGAATAAGCTCAGTGGTAGCCTTGAGAAGTTGTTGATTGATGCTGAATATGATTATTGTGATGCTGAGATTCTTGTTGAAGACATCCCTGTGGGGGTTCATAGATGTATATTGGCTTCACGCAGTCCCTATTTTCATGAGCTTTTCAAGAAAGGGAACAAGGGTGATGGTTCGGTGAAGGAAGGGAAGCCAAGGTATCTCATGTCAGAATTGGTGCCTTATGGGGCAGTTGGACATGAAGCTTTCCTTGTTTTCTTGCATTATTTGTATACTGGGAATGTTAAGGCTTCACCACCAGAAGTAACAACTTGTGTTGATGAAACATGTATCCATGATGCGTGCCGCCCTGCTATCAACTCTGCTTTGGAACTCATGTATGCATCTGCCACTTTTCAGATGAAAGAGCTGGTTTTGCTTTTTCAGCGGCGCCTTCTAAACTTTGTTGAGAAAGCTGTGGTGGAAGATGTAATTCCTATTCTTATGGCTGCCTTCCACTGCCAACTAAGCCAGCTTCTCTCTCAATGCACTCAGAGAATTGCAAGGTCTGACCTTGATAGCACCTCTTTGGAAAAAGAACTTCCTCATGAAGTTGTGGATGAAATCAAATCACTCCGAATCCAATCTATGCCAGAGTCCACACCTGATGCAATGGAAGTGGAACCTCCTTCAAATGATAAGAGTGTCAAGAGAATCCATAAGGCCTTGGACTCTGATGATATTGAGCTACTAGAGCTTCTTTTGAAAGAGTCTAGTGTCACTGTAGATGATGCTTATGCCCTGCACTATGCCTGTACCTATAGTGATTCTAAGGTTGTTAAAGAGGTTCTTAAAAAAGGCTGGGCCGATATTAACATCAGAAATCCACGAGGATATACGGTTCTTCACGTGGCTGCGAGGCGAAAGGATCCAACCATTTTGGTAGCACTGCTGAATAAAGGGGCCTGTGCAGCAGATACTACTCCTGATGGACAAACTGCTCTTGCAATTTGTCAGAGGTTGACAAGGCACAAGGATTATCATGAGAAAACAGAGCAGGGGAAGGAATCTAACAAAGACAAGCTTTGTGTTGATGTCCTGGAAAGAGAAATGAGAAGGACTTCTATGTCTGTAAATATGTCTGTTTCATCACAGTTAACTGGTGATGATTTGCATATGAGGCTGGATTACTTTGAGGATCGAGTTGCATTTGCTAAGCTGTTGTTTCCTGCTGAGGCAAGAGTAGCCATGGAGAATGCTGAGGCAGATTCAACTTCACAGTATGCAAGCTCATCAGCTTTGAAGAGGTCAGGTGGCAATCTTAAAGAAGTGGACCTGAATGAAACTCCCTCGGTTCGAACCAAAAAAATGCAATTAAGATTGCATGCCCTTATGAAAACAGTTGAGAATGGTAGGCGCTTCTTTCCCCATTGCTCTGAGGTGCTTGATAAGTTCTTGGAAGACGACATGCCTGATGCCTTCTTCCTGGAGAAGGGCACGGAAGAGGAGCAAAGAATCAAGAAAACACGCTTCATGGAACTCAAAGATGATGTGCAGAAGGCATTTCACAAGGACATGGCTGAAAACAACCACCACCAATCTGGTTTCTCATCCTCAGTGTCTTCCTCTTCATCATCATCTCGCAGGGAAGGTCTAGGCCACAAAGTGAAGAGAAAGTGA 1791 0.4333 MDIANEASSSLSFVSSQLSNGGCSSNYNISSSTSNENGESIEIKSLNKLSGSLEKLLIDAEYDYCDAEILVEDIPVGVHRCILASRSPYFHELFKKGNKGDGSVKEGKPRYLMSELVPYGAVGHEAFLVFLHYLYTGNVKASPPEVTTCVDETCIHDACRPAINSALELMYASATFQMKELVLLFQRRLLNFVEKAVVEDVIPILMAAFHCQLSQLLSQCTQRIARSDLDSTSLEKELPHEVVDEIKSLRIQSMPESTPDAMEVEPPSNDKSVKRIHKALDSDDIELLELLLKESSVTVDDAYALHYACTYSDSKVVKEVLKKGWADINIRNPRGYTVLHVAARRKDPTILVALLNKGACAADTTPDGQTALAICQRLTRHKDYHEKTEQGKESNKDKLCVDVLEREMRRTSMSVNMSVSSQLTGDDLHMRLDYFEDRVAFAKLLFPAEARVAMENAEADSTSQYASSSALKRSGGNLKEVDLNETPSVRTKKMQLRLHALMKTVENGRRFFPHCSEVLDKFLEDDMPDAFFLEKGTEEEQRIKKTRFMELKDDVQKAFHKDMAENNHHQSGFSSSVSSSSSSSRREGLGHKVKRK* 597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g0402 596 SMART ANK_2a 300 330 IPR002110 GO:0005515
Dod08g0402 596 SMART ANK_2a 334 363 IPR002110 GO:0005515
Dod08g0402 596 SMART ANK_2a 271 299 IPR002110 GO:0005515
Dod08g0402 596 Pfam BTB/POZ domain 62 142 IPR000210 GO:0005515
Dod08g0402 596 Gene3D - 269 408 IPR036770 -
Dod08g0402 596 PANTHER REGULATORY PROTEIN, PUTATIVE-RELATED 1 592 - -
Dod08g0402 596 ProSiteProfiles Ankyrin repeat region circular profile. 334 359 - -
Dod08g0402 596 Gene3D Potassium Channel Kv1.1; Chain A 30 226 IPR011333 -
Dod08g0402 596 SUPERFAMILY POZ domain 62 191 IPR011333 -
Dod08g0402 596 Pfam NPR1/NIM1 like defence protein C terminal 376 580 IPR021094 -
Dod08g0402 596 Pfam Domain of unknown function (DUF3420) 228 277 IPR024228 -
Dod08g0402 596 MobiDBLite consensus disorder prediction 568 586 - -
Dod08g0402 596 MobiDBLite consensus disorder prediction 559 596 - -
Dod08g0402 596 ProSiteProfiles Ankyrin repeat profile. 334 359 IPR002110 GO:0005515
Dod08g0402 596 Pfam Ankyrin repeats (many copies) 326 374 IPR002110 GO:0005515
Dod08g0402 596 PANTHER REGULATORY PROTEIN NPR3 1 592 IPR044292 GO:0009862|GO:2000022|GO:2000031
Dod08g0402 596 SUPERFAMILY Ankyrin repeat 272 378 IPR036770 -
Dod08g0402 596 CDD BTB_POZ_NPR_plant 47 193 - -
Dod08g0402 596 ProSiteProfiles BTB domain profile. 65 143 IPR000210 GO:0005515
Dod08g0402 596 SMART BTB_4 65 193 IPR000210 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g0402 Dod-Chr8 4343367 4348393 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Dod08g0402 NPR1_like_C 2.6e-87 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g0402 K14508 - gmx:100814739 884.404