Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g0394 ATGATGGATATTATGACCAAGTTACGAAACTCCGATGACATGAAAGAAGATGATGAAGTTGTGCTTCCTGGGTTCAGATTCCATCCAACAGATGAAGAGCTTGTTGGGTTTTATCTGCGGAGAAAGGTGGAGAAGAAGCCTCTTAGAATTGAACTCATCAAACATGTTGACATCTACAAATATGATCCGTGGGATCTTCCAAAAGTTAGTTCTGTGGGGGAGAAGGAATGGTATTTCTTCTGCATGAGGGGGAGAAAGTACAGGAACAGCATAAGGCCTAACAGGGTGACAGCCTCAGGGTTTTGGAAAGCCACAGGGATTGACAAGCCTATATACAGTGTTAAGGAGCCACATGAATGCATTGGCCTCAAGAAATCCTTGGTCTACTACCGTGGAAGTGCTGGCAAAGGCACCAAAACTGATTGGATGATGCATGAGTTTCGCCTTCCACCTAATATCAAAAACAGCAACAGCAATCCAGAGCCTAATGCTAGCAAGGATAATGTTCAAGAAGCTGAAGTTTGGACACTATGCAGAATATTCAAAAGAGTCCCATCATACAAGAAGTACACACCAAGTTTGAAAGACTCATCACCACAAGTCATGACCAGACCCAGCAAAACTGACTCTCCAAGTTCTAAATCATGCAGCATTGAATCTGACAACAGCAAGCCATACTTGACTTTCTCTGCAGACTCAGTGGTCATTCACCAAAATGAAAGGAAACCAGTTATTGAACATGTTGTTGATGAAAGGAACAACCACTTGTTTGTAGGTCAGTTAGACCATCATGTAGCACAGGCTCCAGCAACTTTGTCATACTCTTGGAACCATGATGTGGAAGATTTATTTGCAAATGAGAATTGGGATGATCTCAGATCTGTGGTTCAGTTTGCCACTGATCCTTCCAAGGTTTATGACTGTAGAGAGTTAAATATTAGATTTTAA 948 0.4188 MMDIMTKLRNSDDMKEDDEVVLPGFRFHPTDEELVGFYLRRKVEKKPLRIELIKHVDIYKYDPWDLPKVSSVGEKEWYFFCMRGRKYRNSIRPNRVTASGFWKATGIDKPIYSVKEPHECIGLKKSLVYYRGSAGKGTKTDWMMHEFRLPPNIKNSNSNPEPNASKDNVQEAEVWTLCRIFKRVPSYKKYTPSLKDSSPQVMTRPSKTDSPSSKSCSIESDNSKPYLTFSADSVVIHQNERKPVIEHVVDERNNHLFVGQLDHHVAQAPATLSYSWNHDVEDLFANENWDDLRSVVQFATDPSKVYDCRELNIRF* 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g0394 315 Gene3D NAC domain 30 186 IPR036093 GO:0003677|GO:0006355
Dod08g0394 315 MobiDBLite consensus disorder prediction 190 220 - -
Dod08g0394 315 PANTHER - 6 310 - -
Dod08g0394 315 Pfam No apical meristem (NAM) protein 23 149 IPR003441 GO:0003677|GO:0006355
Dod08g0394 315 ProSiteProfiles NAC domain profile. 21 183 IPR003441 GO:0003677|GO:0006355
Dod08g0394 315 MobiDBLite consensus disorder prediction 191 220 - -
Dod08g0394 315 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 6 310 - -
Dod08g0394 315 SUPERFAMILY NAC domain 20 182 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g0394 Dod-Chr8 4132374 4136207 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g0394 11 251 NAC Transcription Factor Family AT5G39820 51.394 1.86e-79 243
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Dod08g0394 NAM 5.4e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g0394 - - gsj:114384349 457.218
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g0394 08 4132374 4136207 Dod08g0394 08 4132374 4136207 ECH