Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g0369 ATGGCTCAAGCTACACCAGGTGGGAATGCCTTAATTCTACCAATCCAAGGAGCTTGGGGGGCGAAATCGTTTGACTTGTGGCAGCCGATTATGTCGTCCAATAGTTCTTTGAATGTGGAATTGTCAAAGAAGACATCATTTTTTGGTTTGAAACGGTGGATTTTGATTGGGATAGGTGTTGGTGCCTTTATAGTGCTGATTCTTTGTATAATGTCCATATGGGTGATGTTCCGGAGAAAATCTAGGAGATCTCTGGACAAGTACTCTCTATCCAAAATTCCCAATGTCTCGAAAGATATCGACGTTGACAGGGTTGGGGTGCAGAGTTCTCTTGTTGAACCAGAAAATGTGTATGTTCCAGTTCATGACAAGGCAAATGATAAGACTTCAGATAAGGTACCAGTTCATCTGGTGGTGAGCAAATCCAGTGATCACGATAATATTAGTCAGTGCAGCTCAAGTTATCACCATGAGCAGGGATTTAGTTCAGTGTCGGGGGAAGATGGAAGCTCTGGGAATGTTAAGAAGCAGTCTTCATTGTCCTATGGAGGGATGGTGACTGCCTCTCCTTTAGTCGGATTACCAGAATTTTCTCATCTTGGGTGGGGCCACTGGTTTACACTCAGAGATCTTGAGCTGGCAACCAATCGTTTCTCAGCAGAGAACGTTATTGGTGAGGGTGGCTATGGGGTTGTTTACAAGGGCAGACTGATCAATGGAACCGATGTGGCAGTGAAGAAACTTCTTAACAACTTGGGACAAGCGGAGAAAGAATTCAGGGTTGAAGTGGAGGCTATAGGCCATGTTAGACATAAACATCTTGTGCGCCTGCTTGGATATTGCGTGGAGGGTGTTCACAGGCTGCTGGTATATGAATATGTGAACAATGGTAACTTAGAACAATGGTTGCATGGGGCCATGCAACAACATGGGACACTTACCTGGGAGGCCCGTATGAAAGTCACTCTTGGCACAGCCAAAGCGCTTGCCTACTTACATGAAGCAATAGAACCAAAGGTTGTTCACCGGGATATAAAGTCTAGCAACATATTGATTGATGATGAGTTCAATGCAAAGGTTTCTGATTTTGGTTTGGCCAAACTATTGGATTCAGGAGAAAGTCACATAACCACTAGGGTCATGGGAACATTTGGTTATGTGGCACCAGAATATGCTAATAGTGGTCTGTTAAATGAGAAGAGTGACATATATAGCTTTGGTGTCCTCCTGTTGGAAGCAGTTACTGGAAGGGACCCTGTAGACTATGCACGCCCTGCTACTGAGGTTAATCTTGTTGAATGGCTCAAGATTATGGTAGGTACAAGGAGGGCTGAGGAAGTTGTAGACTCAAGGCTTCAGGTTAAACCATCAACACGTGCTTTAAAGCGTGCCCTTCTGGTTGCACTTAGGTGCGTTGATCCTGATGCAGACAAGAGGCCCAAAATGAGTCAGGTTGTGCAGATGCTCGAAGCTGATGAATATCCATTTCGAGAGGATCGAAGGAACAGAAAGAGCCGCACCCCCAGCCTAGAAATCGAACCTGTGAAGGATATTTCTGGTCCATCTGATGCTGAAAAGGTGGGGAATTCTGAAAGCTTTGTGCCGGAGAGAACTGGTGGATAG 1623 0.4516 MAQATPGGNALILPIQGAWGAKSFDLWQPIMSSNSSLNVELSKKTSFFGLKRWILIGIGVGAFIVLILCIMSIWVMFRRKSRRSLDKYSLSKIPNVSKDIDVDRVGVQSSLVEPENVYVPVHDKANDKTSDKVPVHLVVSKSSDHDNISQCSSSYHHEQGFSSVSGEDGSSGNVKKQSSLSYGGMVTASPLVGLPEFSHLGWGHWFTLRDLELATNRFSAENVIGEGGYGVVYKGRLINGTDVAVKKLLNNLGQAEKEFRVEVEAIGHVRHKHLVRLLGYCVEGVHRLLVYEYVNNGNLEQWLHGAMQQHGTLTWEARMKVTLGTAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPEYANSGLLNEKSDIYSFGVLLLEAVTGRDPVDYARPATEVNLVEWLKIMVGTRRAEEVVDSRLQVKPSTRALKRALLVALRCVDPDADKRPKMSQVVQMLEADEYPFREDRRNRKSRTPSLEIEPVKDISGPSDAEKVGNSESFVPERTGG* 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g0369 540 CDD STKc_IRAK 224 490 - -
Dod08g0369 540 MobiDBLite consensus disorder prediction 144 176 - -
Dod08g0369 540 MobiDBLite consensus disorder prediction 496 511 - -
Dod08g0369 540 Pfam Protein kinase domain 220 487 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod08g0369 540 PANTHER OS01G0323000 PROTEIN 27 536 - -
Dod08g0369 540 ProSitePatterns Serine/Threonine protein kinases active-site signature. 340 352 IPR008271 GO:0004672|GO:0006468
Dod08g0369 540 PANTHER RECEPTOR-LIKE KINASE PLANT 27 536 - -
Dod08g0369 540 Gene3D Phosphorylase Kinase; domain 1 200 293 - -
Dod08g0369 540 ProSitePatterns Protein kinases ATP-binding region signature. 224 247 IPR017441 GO:0005524
Dod08g0369 540 MobiDBLite consensus disorder prediction 496 540 - -
Dod08g0369 540 SUPERFAMILY Protein kinase-like (PK-like) 202 496 IPR011009 -
Dod08g0369 540 ProSiteProfiles Protein kinase domain profile. 218 497 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod08g0369 540 Gene3D Transferase(Phosphotransferase) domain 1 294 506 - -
Dod08g0369 540 SMART serkin_6 218 489 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g0369 Dod-Chr8 3962991 3968792 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g0369 26 492 Trihelix Transcription Factor Family AT1G70460 39.619 5.96e-96 305
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Dod08g0369 Pkinase 8.1e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g0369 - - gmx:100778444 900.582
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g0369 08 3962991 3968792 Dod08g0369 08 3962991 3968792 ECH
Dod05g0323 05 4050952 4055708 Dod08g0369 08 3962991 3968792 PCT