Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g0366 ATGCATGAGCCCTTTCTAAGCCTTTTCTCCAGGAAAGGAGAAGCACATTCACCAAGCAGACCATCATCACCCAATGAACAATGTGTCCATGATCTTGTTCTTGCCCCATCGCTGAACCAATCTGGCTCTCCTCATATCACCAGTGAAGCCAAGATTCCTTATGTAAATCTCATAGCAAACTTGAGCATCAAGAAAAGGAAGATTACTCATCGCTCGCGCTCTGCTCCAACTGTTCTATACACTGACACTGGGGTAAACTTTCATGAGGCCTCTGAGTCTGAACCCAGACCAGTACAGAAGCCATCAACTTTAATTATCAGTGTATCTTTCATTGGTGTATTCTTGTATTTAGCAGCTGGGGTTATAGTGTACATGACAAGTGGGAGTTTCAAGGGCACCACCACACTCAGGCCTGTAGATGCTGTGTACTTCACAGTGGTAACTCTTTGCACAATTGGGTATGGAGACATTATACCTGACTCTACATTTACCAAGATATTTACATGTGGTTTCATTCTGGTTGGCTTTGGACTTATTGGTTTTCTGCTCAGTGGCTTGGTTGAATACATTTGTGATACACAAGAGGCATTCTTATTGAGCATGATGGATGAGAATCGATATAAGAGAATTCTCATGACGTATATGGTTGATGAACAGAAAGGAAGAATGAGGATAAGAACCAAAGTTTGTCTAGCTTTAGCAGTTGTCATTGGCTGCATTGGCATAGGAACAGTTATAGTTCACTTTGCTGAAGGTATGGATTGGGAAGACAGTTTCTATCTCTCCATTACTTCTGTTACAACAGTTGGTTATGGGGATTATTCTTTCAAAACTGTAACTGGAAGATGTTTTGCAATTCTATGGCTTTTGGTAAGCACACTGGCAGTTGCCAGGGCCTTTCTGTACCTCACTGATTATGGCATGCACAAGAGGAAACGAAAGATGGCAAAATGGGTTCTTCAGAAGAAGATAACCTTGTCAGATTTAGCGGCTGCAGACCTTGATAATGATGGATCAATCAGCAAGTCAGAATTTTTTATATACAAGCTTAAGCAAATGGGGAAGATAACTGAAATAGACATTCTGCAAATAAGCAAACAATTTGATTCCTTGGAGTGTGGCATGCATGGCAAGATTAGTCTTGCTGACCTCATGGAAAGCGTATAA 1167 0.4122 MHEPFLSLFSRKGEAHSPSRPSSPNEQCVHDLVLAPSLNQSGSPHITSEAKIPYVNLIANLSIKKRKITHRSRSAPTVLYTDTGVNFHEASESEPRPVQKPSTLIISVSFIGVFLYLAAGVIVYMTSGSFKGTTTLRPVDAVYFTVVTLCTIGYGDIIPDSTFTKIFTCGFILVGFGLIGFLLSGLVEYICDTQEAFLLSMMDENRYKRILMTYMVDEQKGRMRIRTKVCLALAVVIGCIGIGTVIVHFAEGMDWEDSFYLSITSVTTVGYGDYSFKTVTGRCFAILWLLVSTLAVARAFLYLTDYGMHKRKRKMAKWVLQKKITLSDLAAADLDNDGSISKSEFFIYKLKQMGKITEIDILQISKQFDSLECGMHGKISLADLMESV* 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g0366 388 PANTHER POTASSIUM CHANNEL, SUBFAMILY K 48 383 IPR003280 GO:0005267|GO:0016020|GO:0071805
Dod08g0366 388 Gene3D - 94 194 - -
Dod08g0366 388 PANTHER OS01G0696100 PROTEIN 48 383 - -
Dod08g0366 388 SUPERFAMILY Voltage-gated potassium channels 205 323 - -
Dod08g0366 388 SUPERFAMILY Voltage-gated potassium channels 103 190 - -
Dod08g0366 388 Gene3D - 196 331 - -
Dod08g0366 388 MobiDBLite consensus disorder prediction 1 26 - -
Dod08g0366 388 Pfam Ion channel 113 190 IPR013099 -
Dod08g0366 388 Pfam Ion channel 236 306 IPR013099 -
Dod08g0366 388 ProSitePatterns EF-hand calcium-binding domain. 333 345 IPR018247 -
Dod08g0366 388 PRINTS Two pore domain K+ channel signature 267 276 IPR003280 GO:0005267|GO:0016020|GO:0071805
Dod08g0366 388 PRINTS Two pore domain K+ channel signature 147 175 IPR003280 GO:0005267|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g0366 Dod-Chr8 3931535 3933305 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g0366 70 386 Ion Channels AT4G18160 49.533 4.95e-100 302
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g0366 K05389 - gmx:100789639 540.421