Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g0363 ATGTTTGGCGAAATGGATAGAAAGCACGAACCAGACAAAGGGAACACCAATATATTTCCCACCAGAGTCCCAAAAGCAGTTTCACCGGTCTCTTCTGCAGCTGAGGGGGAAGCCTTAAGGCGGCCGCGCGGCCGACCTGCCGGCTCTAAGAACAAGCCAAAGCCCCCAATAATTGTCACAAGGGACAGTGCTAATGCACTCAAGGCTCATGCCATGGAAGTTAGCTCTGGCTGTGATGTGAATGAGTGCTTGTTAAACTTTGCAAGGAGGAACCAACGAGGCCTATGCATACTAAGTGGAACTGGTTGTGTAACAAATGTGACCCTGCGCCAACCGGCATCATCTGGTGCCATTGTGACCCTACATGGAAGATTTGAGATCCTCTCACTTCTGGGGTCTGTCCTCCCCCCACCAGCACCACCAGGGATCACTGGCCTCACAATTTACTTAGCTGGTGCTCAGGGACAAGTTGTGGGGGGTGGTGTTGTTGGTGCCTTGATTGCTTCAGGACCTGTTGTGATCATGGCTGCATCATTCATGCATGCTACCTTCGATCGTCTGCCATTGGAAGATGGTGAACTTCCTGCTGCAATGCAGAATCAGCATTACCAAGATGGATGCGTTGCACACCATCTTGATATCTTGGATTTGTATGCAATGCCACAGAACCTGCTCACTAATGGTACAATGGCCCCAGAGATATACTCTTGGGCACCGGGGAGGAATTTGTCAAAAACCTGA 741 0.5034 MFGEMDRKHEPDKGNTNIFPTRVPKAVSPVSSAAEGEALRRPRGRPAGSKNKPKPPIIVTRDSANALKAHAMEVSSGCDVNECLLNFARRNQRGLCILSGTGCVTNVTLRQPASSGAIVTLHGRFEILSLLGSVLPPPAPPGITGLTIYLAGAQGQVVGGGVVGALIASGPVVIMAASFMHATFDRLPLEDGELPAAMQNQHYQDGCVAHHLDILDLYAMPQNLLTNGTMAPEIYSWAPGRNLSKT* 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g0363 246 Gene3D - 68 203 - -
Dod08g0363 246 MobiDBLite consensus disorder prediction 1 57 - -
Dod08g0363 246 SUPERFAMILY AF0104/ALDC/Ptd012-like 64 196 - -
Dod08g0363 246 ProSiteProfiles PPC domain profile profile. 64 202 IPR005175 -
Dod08g0363 246 MobiDBLite consensus disorder prediction 1 15 - -
Dod08g0363 246 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 16 8 245 - -
Dod08g0363 246 CDD DUF296 70 150 IPR005175 -
Dod08g0363 246 Pfam Plants and Prokaryotes Conserved (PCC) domain 69 179 IPR005175 -
Dod08g0363 246 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 8 245 IPR014476 GO:0003680
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g0363 Dod-Chr8 3921161 3922357 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g0363 7 245 AT-hook Motif Nuclear Localized (AHL) Family AT2G42940 70.954 3.02e-104 301
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g0363 - - gmx:100804941 400.208
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g0363 08 3921161 3922357 Dod08g0363 08 3921161 3922357 ECH