Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g0344 ATGAGGACAGTTCTCAAGGTTGTCGATAACTCGGGGGCTAAGAAAGTGATGTGCATACAAGCTTTGAAAGGGAAGAAAGGGGCAAGATTAGGCGACACAATAATAGCATCAGTGAAGGAAGCTCACCCTAATGGCAAAGTTAAGAAAGGGAAGGTTGTATATGGGGTGGTTGTTAGAGCTGCAATGCAAAGGGGGAGATGTGATGGGAGTGAAGTCAAGTTTGATGACAATGCTGTGGTGCTTGTTGACAAGCAAGGACAGCCAATTGGGACCAGAGTTTTTGGGCCAGTGCCTCATGAGCTGAGGCAAAGGAAGCATGTCAAGATTCTTACTTTGGCGGGGCATATTGCTTAA 354 0.4633 MRTVLKVVDNSGAKKVMCIQALKGKKGARLGDTIIASVKEAHPNGKVKKGKVVYGVVVRAAMQRGRCDGSEVKFDDNAVVLVDKQGQPIGTRVFGPVPHELRQRKHVKILTLAGHIA* 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g0344 117 Pfam Ribosomal protein L14p/L23e 1 116 IPR000218 GO:0003735|GO:0005840|GO:0006412
Dod08g0344 117 Gene3D Ribosomal protein L14 1 117 IPR036853 GO:0003735|GO:0005840|GO:0006412
Dod08g0344 117 PANTHER 50S RIBOSOMAL PROTEIN HLP, MITOCHONDRIAL-LIKE ISOFORM X1 1 117 - -
Dod08g0344 117 SUPERFAMILY Ribosomal protein L14 2 116 IPR036853 GO:0003735|GO:0005840|GO:0006412
Dod08g0344 117 Hamap 50S ribosomal protein L14 [rplN]. 1 117 IPR000218 GO:0003735|GO:0005840|GO:0006412
Dod08g0344 117 TIGRFAM rplN_bact: ribosomal protein uL14 2 116 IPR005745 GO:0003735|GO:0006412|GO:0015934
Dod08g0344 117 SMART Ribosomal_L14_2 1 117 IPR000218 GO:0003735|GO:0005840|GO:0006412
Dod08g0344 117 ProSitePatterns Ribosomal protein L14 signature. 55 81 IPR019972 -
Dod08g0344 117 PANTHER 50S/60S RIBOSOMAL PROTEIN L14/L23 1 117 IPR000218 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g0344 Dod-Chr8 3738093 3739666 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g0344 9 100 Cytoplasmic Ribosomal Protein Gene Family AT3G04400 36.364 1.96e-09 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g0344 K02874 - gmx:100818301 213.001