Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g0341 ATGGAAACCAAGAAGCTCCAGCGCCGTTTTTCACTCGGCCGGCAATCCTCCATGGCGCCGGAGACTCCCACCGCCGGCGGCGATAACTCCGGCGATGAGGAAATTGTGGGGTTGGAGGGAGTGGTGGACCCGACGGTGAGGTTGATGTATCTGGCGAACGAAGGTGACATAGAAGGGATAAAGGAGCTGTTGGATTCGGGTGGTGACGTCAACTTCAGGGACATCGACGGCCGCACCGCCCTCCACGTGGCGGCCTGTCAGCGCCGCACCGATGTTGTCGACTTGTTGCTTCAAAGGGGCGCTGAGGTTGACCCGAGGGACCGCTGGGGCAGCACGCCTCTAGCTGATGCAATGTACTACAAAAATCATGATGTTGTAAAACTTTTGGAGAAACATGGTGCAAAACCCCCGATGGCTCCCATGCATGTCCAGAATGCTCGTGAAGTCCCTGAATATGAGATTCATCCTTCTGAACTTGATTTTACAAATAGTGTTTGCATAACAAAGGGGACTTTCCGTATTGCATTGTGGCGTGGAACTCAAGTTGCTGTCAAAACACTTGGGGAGGAAGTGTTCAATGATGAGGATAAAGTAAACGCATTTCACGATGAGCTTGCATTACTTCAAAAAATACGCCATCCAAATGTAGTCCAGTTTTTGGGTGCTGTAACACAAAGCACCCCAATGATGATTGTCACAGAATACCTTCCCCAGGGAGATCTTCGAGCCTACTTGAAGCGGAAAGGTGCACTAAAACCAACAATAGCTGTGAAGTTTGCACTCGATATAGCTAGGGGAATGAATTATTTGCATGAACATAAACCAGAAGCCATTATTCACCGAGATCTTGAGCCTTCAAATATACTGCGGGATGATTCTGGGCATCTGAAAGTTGCAGACTTTGGAGTTAGCAAGTTGCTCAAAGTTGCAAAAACAGTCAAAGAAGACAAGCCAGTGACTGCATGCCAGGATTCATGGCGCTATGTTGCTCCAGAGGTCTACAAAAATGAGGAATATGACACCAAAGTGGATGTGTTTTCATTTGCTCTGATATTACAGGAGATGATAGAAGGTTATCCACCATTTTATACTAAGCCGGAAAATGAAGTACCTAAAGCATACGTTGAAAATGACCGTCCACCATTCAGGGCTCCACCCAAGCTATATGCTTATGGACTAAAACAGTTAATAGAGGAATGTTGGGATGAAAAACCCTACAAACGACCAACATTTAGGCAAATAATTGGGAGATTGGAAGGCATCAACTGCCATCTCGATCAGAAGAAGCGCTGGAAGGTTCGCACTCCTACATGCATCCAGAATCTCGAGGCCTTGTTTAAGGGGTACCGCACAAGTCCTGGTAGCCGATCATCTCGCTCTACACCAAGATAA 1392 0.4734 METKKLQRRFSLGRQSSMAPETPTAGGDNSGDEEIVGLEGVVDPTVRLMYLANEGDIEGIKELLDSGGDVNFRDIDGRTALHVAACQRRTDVVDLLLQRGAEVDPRDRWGSTPLADAMYYKNHDVVKLLEKHGAKPPMAPMHVQNAREVPEYEIHPSELDFTNSVCITKGTFRIALWRGTQVAVKTLGEEVFNDEDKVNAFHDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPQGDLRAYLKRKGALKPTIAVKFALDIARGMNYLHEHKPEAIIHRDLEPSNILRDDSGHLKVADFGVSKLLKVAKTVKEDKPVTACQDSWRYVAPEVYKNEEYDTKVDVFSFALILQEMIEGYPPFYTKPENEVPKAYVENDRPPFRAPPKLYAYGLKQLIEECWDEKPYKRPTFRQIIGRLEGINCHLDQKKRWKVRTPTCIQNLEALFKGYRTSPGSRSSRSTPR* 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g0341 463 SMART ANK_2a 76 105 IPR002110 GO:0005515
Dod08g0341 463 SMART ANK_2a 109 138 IPR002110 GO:0005515
Dod08g0341 463 SMART ANK_2a 42 72 IPR002110 GO:0005515
Dod08g0341 463 CDD STKc_MAP3K-like 175 418 - -
Dod08g0341 463 Pfam Protein tyrosine and serine/threonine kinase 178 417 IPR001245 GO:0004672|GO:0006468
Dod08g0341 463 MobiDBLite consensus disorder prediction 10 24 - -
Dod08g0341 463 ProSiteProfiles Ankyrin repeat profile. 76 108 IPR002110 GO:0005515
Dod08g0341 463 Pfam Ankyrin repeats (3 copies) 48 136 IPR002110 GO:0005515
Dod08g0341 463 Gene3D Phosphorylase Kinase; domain 1 154 236 - -
Dod08g0341 463 SUPERFAMILY Protein kinase-like (PK-like) 160 422 IPR011009 -
Dod08g0341 463 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 10 446 - -
Dod08g0341 463 Gene3D - 41 149 IPR036770 -
Dod08g0341 463 ProSiteProfiles Ankyrin repeat region circular profile. 76 108 - -
Dod08g0341 463 MobiDBLite consensus disorder prediction 1 33 - -
Dod08g0341 463 PANTHER INTEGRIN-LINKED KINASE FAMILY PROTEIN 10 446 - -
Dod08g0341 463 Gene3D Transferase(Phosphotransferase) domain 1 238 446 - -
Dod08g0341 463 SUPERFAMILY Ankyrin repeat 47 139 IPR036770 -
Dod08g0341 463 PRINTS Tyrosine kinase catalytic domain signature 272 290 IPR001245 GO:0004672|GO:0006468
Dod08g0341 463 PRINTS Tyrosine kinase catalytic domain signature 389 411 IPR001245 GO:0004672|GO:0006468
Dod08g0341 463 PRINTS Tyrosine kinase catalytic domain signature 343 365 IPR001245 GO:0004672|GO:0006468
Dod08g0341 463 PRINTS Tyrosine kinase catalytic domain signature 233 246 IPR001245 GO:0004672|GO:0006468
Dod08g0341 463 PIRSF ILK 2 441 - -
Dod08g0341 463 ProSiteProfiles Protein kinase domain profile. 126 421 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g0341 Dod-Chr8 3703743 3709226 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g0341 1 441 MAP Kinase Kinase Kinase AT4G18950 68.326 0.0 590
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-5 Dod08g0341 PK_Tyr_Ser-Thr 1.3e-54 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g0341 - - gmx:100795964 780.785