Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g0328 ATGATTTGCACGGTGAAACAACCAGGTATAGGGATCAGAGGTTCGGGGGTTGTGTTCAGGGAAAAGGGTTCAACCCAAGTTCAGTCATGGCCCCTTGTTTTGCCTTCCATCACAAGAGAGAACAACCCTCAGAGATCTATTGTTTCAGTGCAGAAGCCACTGCACCTTTCTGCTGTTGTTGGTGTTGGGAACTTTGTTGGGTCAGTGAGGCGTGAGAGGGGTGAGTTTGTGACTTGTGGTGCCTATGAGGCTGATAGATCAGAGGTTGAAGGAGGAGCTGCTGCTTCTGGTGATCAACCATCAGAGGCAGCTAAGAAGGTGAAGATTGGGATATATTTTGCAACATGGTGGGCTCTGAATGTTGTGTTCAATATTTATAACAAGAAGGTGCTGAATGCATACCCTTACCCTTGGCTTACTTCAACACTCTCCCTTGCATGTGGCTCTCTTATGATGTTGATCTCCTGGGCCACTAGGATTGCTGAGGCTCCTAAGACTGATCTTGAGTTTTGGAAGTCGTTGTTCCCTGTTGCTGTTGCACATACAATTGGTCATGTAGCTGCAACTGTTAGTATGTCAAAAGTTGCAGTATCATTCACCCATATTATCAAGAGTGGGGAGCCTGCTTTCAGTGTATTGGTTTCCAGATTTATTTTGGGTGAGACCTTCCCAGTGCCTGTCTATCTGTCTTTGATTCCAATCATTGGTGGATGTGCACTTGCTGCCGTGACTGAGCTCAATTTCAATATGATTGGTTTTATGGGGGCCATGATATCAAATTTGGCATTTGTATTCCGTAATATCTTTTCAAAAAGGGGTATGAAGGGAAAGTCTGTTAGCGGAATGAATTACTACGCATGTTTATCTATGTTGTCCCTGGTAATTCTCACACCATTTGCAATTGCTGTGGAGGGACCACAGATGTGGGCTGCTGGATGGCAAACTGCCCTCTCTCAAATTGGACCTCAGTTTATATGGTGGGTGGCAGCTCAGAGCATATTTTATCATCTGTACAATCAGGTGTCATACATGTCTCTGGATGAGATCTCACCCTTGACATTTAGCATTGGAAACACCATGAAACGTATCTCTGTTATAGTTTCTTCAATCATTATCTTCCATACACCAGTTCAGCCCATCAATGCACTTGGAGCTGCTATTGCCATCCTTGGAACCTTCTTGTATTCACAGGCAAAGCAGTAA 1203 0.4447 MICTVKQPGIGIRGSGVVFREKGSTQVQSWPLVLPSITRENNPQRSIVSVQKPLHLSAVVGVGNFVGSVRRERGEFVTCGAYEADRSEVEGGAAASGDQPSEAAKKVKIGIYFATWWALNVVFNIYNKKVLNAYPYPWLTSTLSLACGSLMMLISWATRIAEAPKTDLEFWKSLFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFILGETFPVPVYLSLIPIIGGCALAAVTELNFNMIGFMGAMISNLAFVFRNIFSKRGMKGKSVSGMNYYACLSMLSLVILTPFAIAVEGPQMWAAGWQTALSQIGPQFIWWVAAQSIFYHLYNQVSYMSLDEISPLTFSIGNTMKRISVIVSSIIIFHTPVQPINALGAAIAILGTFLYSQAKQ* 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g0328 400 SUPERFAMILY Multidrug resistance efflux transporter EmrE 151 243 - -
Dod08g0328 400 TIGRFAM tpt: Tpt phosphate/phosphoenolpyruvate translocator 108 399 IPR004696 GO:0016021|GO:0022857|GO:0055085
Dod08g0328 400 PANTHER SOLUTE CARRIER FAMILY 35 24 399 - -
Dod08g0328 400 PANTHER GLUCOSE-6-PHOSPHATE/PHOSPHATE TRANSLOCATOR 2, CHLOROPLASTIC 24 399 - -
Dod08g0328 400 Pfam Triose-phosphate Transporter family 108 396 IPR004853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g0328 Dod-Chr8 3561907 3565635 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g0328 1 399 Antiporters AT5G54800 76.485 0.0 590
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g0328 K15283 - gmx:100801832 639.802
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g0328 08 3561907 3565635 Dod05g0289 05 3620339 3624862 ECH
Dod08g0328 08 3561907 3565635 Dod08g0328 08 3561907 3565635 ECH