Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g0319 ATGGAAGAAGAAATAGAAAAACAAGGAAAAGGAAATATGGCCTCTCAGATTTTCTCTTATCCCGAGCTATGTGCTGCAACTAGGAACTTTCACCCTGACAATATGATTGGTGAAGGAGGCTTTGGAAGGGTATACATAGGATTCATTAAAAGCACAAATCAGGTGGTTGCTGTGAAGCAACTTGACAGGAATGGCTTTCAGGGAAACACACAATTTCTAGTTGAGGTTTTGATTTTGAGTCTCTTGCATCATCCTAACCTTGTCAATTTAGTAGGGTATTGTGCTGATGGTGATCAAAGGGTTCTAGTATATGAGTACATGGTGAATGGTTCTTTAGAAGATCACCTGCTTGATCTAACTCCGGATAAAAAGCCTTTGGACTGGCATACAAGAATGAAAATTGCAAAGGGTGCTGCAAAAGGACTTGAATATTTACATGAAGTAGCAAAGCCACTAGTAATATACCGGTCACTCTTTAAACTCGATGGGCTTAACATTCCTACCCATGGTGCAGATGTAGACCCTCATGCTACACAACCACTATTGAAAGACAGAAGGAAATCTGCATTAATGGTTGATCCATTGCTAGAAAGGAACTACCCCATTAAGGGTCTATACCAAGCAGTAGCAGTTGCAGCAATGTGTCTTCAGGAGGAAGCTGATAACAGGCCTTTGATTAGTGATGTAGTAACAGCTCTTGATGTCTTAGCAAATAAGCAAGTAGATGTAGGAGGTTTAGCTTCTTGGCTCCCAATCTGTGCTGCGTGGGAGAATACAGAGTGGAGAAGAAGAGCAGCCATGGAAGTTCCGTTAAGACCATATTGCCCTTCTTGCTTCTCCCTCTCAGTCTCACACTCTTCTTCCTCCTTCCCTTTCCGTTTGGCTTTGTCTTCGTGGCCCTTTTCAGCTTCTTCAGAGTCTCCTCATAGAAGAAATATCCAATCAATCCAGATTGCCAACGGTGGCCTCCTGAATAGCATTGTGCCTAGTAATTATCCACAATTTAGAGAAGGTTCCTGGTGTCAACAGAGAACATTGGTAAGATTAAATAAATACAATTCCATGAAGTATAAACGTAATTTTCCACATAAGATTCCAGCTCGCGTTTCAAGTATGAAATTTTCAAATGCATCAACTGGCATGCTGGAGGAAATGACAAAGGAGGGAGAGCTGAATTCCGTGCATTCCAATGAGACACAAGTTAGTATTGTGGGTGCAGTTCCTTGCAATCATGGATTATCCACAACAGCTGCTGAAAGAAAATTGTCTGGAGGTGATTATAGAGGCTGGGCTAATGCAAGGTATACGTTGACTGAGAGAAAAAGGGAAATAAACGGTCTGAATAAGTATGAAAGGAAAAATGGTAGTTCCTACACATCTAATAGATTTACTTCCATTCATCAGCAACAGGCTGTTTCTAAAAGTAGGGGTAGCAGTCTTGTACTGCAGGATCATGTTGATCATGTCTTACCCCCTGTTAAACATTCTGGATTAAACAATTCAAAGGTCTGTACAGATTCTGACAGGGTGATGCGACAGTTAAATGAATCTCCTGTGAAGATTAATGAAGACAAAATTGCTAGAGTTAATGGTGATCATGGTTTGGATACAAATGCAAAGGATTTAACTAATGCAACACTCCTTAGTTGGCCACGTGGTACTGAGCAATCAAAACTTAGGGACAGGCTCTGTAGTGTATATGAAGATATTCTGGTTGTTGACAATATTCCTCTTGCAGAGGAAGTTGCTAAGATGCTTACAGTAAAGTACCGGCATCTTATTCATGCGTGTGATACGGAGGTAGCCAAGATAGATGTCAAAGAAGAAACGCCTGTAGATCATGGGGAGATAATATGCTTCAGTATTTATTCTGGTCCAGAAGCTGATTTTGGAGGTGGAAAGTCCTGTATCTGGGTAGATGTTCTTGATGGTGGAGGCAAAGAGATTTTGTGTAAATTTGCTGAATTTTTTAGCGATTCTTCCATAAAGAAGGTCTGGCACAATTATAGCTTTGATTGTCATGTTATAGAGAACTATGGATTTGAAGTTTCTGGTTTTCATGCTGATACAATGCACATGGCACGATTATGGGATTCATCGAGACGTTTGGATGGGGGTTATTCTCTTGAAGGACTTACAGGTGACAAAAGGGTCATGTGTGGGGCTAAGCTGAACCATGAAAAGGATTTACTTGGTAAGGTGTCAATGAAAACTATATTTGGTCGGAAAAAGGTGAAAAAAGATGGATCTGAGGGTAAAACGATTACTATTGCTCCTGTTGAAGAGCTGCAAAGAGATGAACGTATACCTTGGATATGTTATTCTGCCTTAGATGCTAGAAGCACTCTGAAGCTTTACGAGAGCCTGAAGAACCATCTTTTAGGCATGCCTTGGAAACTTGATGGTAAACTTGTTTATGGAAGAACTATGTATGATTTCTACAACGAATTTTGGAGGCCATTTGGGGAGCTTCTAGTCATAATGGAATCTGAGGGAATGCTGGTTGACAGAGCATATCTTTCTGACATAGAAAAGGTGGCCATAGCAGAGCAAGAGGTAGCTGCTAATAGATTCCGGAAATGGGCATGTAAGTATTGTCCTGATGCCAAGTATATGAATGTGGGAAGTGATTTACAGTTGCGCCAGCTGCTTTTTGGCGGCATTGGGAACAGAAAAGACCCCAATCAAACACTTCCAACTGAGCGGATATTCAAAATTCCCAATGTTGATAAAGTGATTGAAGAAGGCAAGAAGGCTCCCACAAAATTTCGTGATATAAAGTTGACGAGCCTTGGGTATAAGCTGGAGACTGAGATGTACACAGCAAGTGGTTGGCCCTCAGTTAGTGGTGATGCTTTAAGGGCCCTGGCTGGAAATATTTCTGCTGAGTATGTCTTTATTGATGAGATTTGTAACTTGGATCCTGATGAAGATGAAAGTCCGTCTCAAAGTCCAACTGCACCTGCACAAATAAACAAGTCTGCATATGGAACAGCCTTTGTAGCTTTTCATACAGAGGAAGAAGGGAGAGAAGCTTGCCATGCAATTGCTGCGTTATGTGAAGTTTGTTCAATCAACTCTTTGATTTCTAATTTCATCCTTCCCCTGCAGGGACATAATATATCAGGAAAGGATAATCGTATTCATTGTTCCTTAAATATCAACACAGAAACAGGACGCTTGTCAGCAAGAAGGCCAAATCTGCAGAATCAACCTGCCTTGGAAAAAGACCGATACAAAATCCGTCAAGCATTCATAGCTGCACCAGGGAATTCTCTTGTAGTTGCTGATTATGGACAGCTGGAACTTAGGATTCTGGCACATCTTGCCAACTGTAAGAGCATGTTAGAGGCTTTTAAAGCTGGTGGAGATTTCCATTCAAGGACTGCAATGAATATGTACCCATATATTCGTGAAGCAGTTGAGAAAAAGCAAGTGCTTCTTGAGTGGCATCCTCAGCCTGGTGAAGAGAGACCCCCAGTTCCTCTACTGAAGGATGCATTTGGTTCGGAAAGAAGGAAAGCTAAAATGCTTAACTTCTCAATTGCTTATGGAAAGACTCCAGTAGGGCTGTCCAAGGATTGGAAGGTTTCCGTGAAAGAAGCTAAGAAAACAGTTGACCTTTGGTACAATGATAGAAAAGAAGTTTTGCAGTGGCAAGAGGAGCGCAAAAAGGAAGCTCGTGAGTTTCATTGTGTTCACACTCTGTTAGGGCGAGCTCGGCGGTTCCCTTTGATGGGCCAAGCCAACACCTATCAGAAAGGTCACATTGAGCGAGCTGCTATTAATACTCCAGTGCAGGGTAGCGCAGCCGATGTTGCCATGTGTGCCATGTTGCAAATTTCCAGTAATAAACAGTTGAAGGAGCTTGGATGGAAGTTACTTCTACAGGTTCATGATGAAGTGATACTGGAAGGACCGACCGAGTCGGCTGAGGCGGCAAAGGCAATAGTAGTTGAGTGCATGTCAAAACCCTTTCGTGGCAAGAATATTCTCAAAGTTGACCTCTCTGTTGATGCCAAGTGTGCTCAAAACTGGTACTCAGCCAAATAG 4053 0.4189 MEEEIEKQGKGNMASQIFSYPELCAATRNFHPDNMIGEGGFGRVYIGFIKSTNQVVAVKQLDRNGFQGNTQFLVEVLILSLLHHPNLVNLVGYCADGDQRVLVYEYMVNGSLEDHLLDLTPDKKPLDWHTRMKIAKGAAKGLEYLHEVAKPLVIYRSLFKLDGLNIPTHGADVDPHATQPLLKDRRKSALMVDPLLERNYPIKGLYQAVAVAAMCLQEEADNRPLISDVVTALDVLANKQVDVGGLASWLPICAAWENTEWRRRAAMEVPLRPYCPSCFSLSVSHSSSSFPFRLALSSWPFSASSESPHRRNIQSIQIANGGLLNSIVPSNYPQFREGSWCQQRTLVRLNKYNSMKYKRNFPHKIPARVSSMKFSNASTGMLEEMTKEGELNSVHSNETQVSIVGAVPCNHGLSTTAAERKLSGGDYRGWANARYTLTERKREINGLNKYERKNGSSYTSNRFTSIHQQQAVSKSRGSSLVLQDHVDHVLPPVKHSGLNNSKVCTDSDRVMRQLNESPVKINEDKIARVNGDHGLDTNAKDLTNATLLSWPRGTEQSKLRDRLCSVYEDILVVDNIPLAEEVAKMLTVKYRHLIHACDTEVAKIDVKEETPVDHGEIICFSIYSGPEADFGGGKSCIWVDVLDGGGKEILCKFAEFFSDSSIKKVWHNYSFDCHVIENYGFEVSGFHADTMHMARLWDSSRRLDGGYSLEGLTGDKRVMCGAKLNHEKDLLGKVSMKTIFGRKKVKKDGSEGKTITIAPVEELQRDERIPWICYSALDARSTLKLYESLKNHLLGMPWKLDGKLVYGRTMYDFYNEFWRPFGELLVIMESEGMLVDRAYLSDIEKVAIAEQEVAANRFRKWACKYCPDAKYMNVGSDLQLRQLLFGGIGNRKDPNQTLPTERIFKIPNVDKVIEEGKKAPTKFRDIKLTSLGYKLETEMYTASGWPSVSGDALRALAGNISAEYVFIDEICNLDPDEDESPSQSPTAPAQINKSAYGTAFVAFHTEEEGREACHAIAALCEVCSINSLISNFILPLQGHNISGKDNRIHCSLNINTETGRLSARRPNLQNQPALEKDRYKIRQAFIAAPGNSLVVADYGQLELRILAHLANCKSMLEAFKAGGDFHSRTAMNMYPYIREAVEKKQVLLEWHPQPGEERPPVPLLKDAFGSERRKAKMLNFSIAYGKTPVGLSKDWKVSVKEAKKTVDLWYNDRKEVLQWQEERKKEAREFHCVHTLLGRARRFPLMGQANTYQKGHIERAAINTPVQGSAADVAMCAMLQISSNKQLKELGWKLLLQVHDEVILEGPTESAEAAKAIVVECMSKPFRGKNILKVDLSVDAKCAQNWYSAK* 1351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g0319 1350 SUPERFAMILY Protein kinase-like (PK-like) 16 158 IPR011009 -
Dod08g0319 1350 ProSiteProfiles Protein kinase domain profile. 30 382 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod08g0319 1350 SMART polaultra3 1080 1310 IPR001098 GO:0003677|GO:0003887|GO:0006260
Dod08g0319 1350 PANTHER DNA POLYMERASE I 545 1350 IPR002298 GO:0003887|GO:0006261
Dod08g0319 1350 SUPERFAMILY DNA/RNA polymerases 810 1350 IPR043502 -
Dod08g0319 1350 Gene3D - 1056 1346 - -
Dod08g0319 1350 Gene3D - 1101 1270 - -
Dod08g0319 1350 CDD DNA_polA_I_Ecoli_like_exo 589 826 - -
Dod08g0319 1350 Gene3D Taq DNA Polymerase; Chain T, domain 4 831 1050 - -
Dod08g0319 1350 PANTHER DNA POLYMERASE I A, CHLOROPLASTIC/MITOCHONDRIAL 545 1350 - -
Dod08g0319 1350 Gene3D Transferase(Phosphotransferase) domain 1 10 243 - -
Dod08g0319 1350 Pfam Protein tyrosine and serine/threonine kinase 33 148 IPR001245 GO:0004672|GO:0006468
Dod08g0319 1350 Gene3D - 575 829 IPR036397 GO:0003676
Dod08g0319 1350 ProSitePatterns Protein kinases ATP-binding region signature. 36 59 IPR017441 GO:0005524
Dod08g0319 1350 Pfam 3'-5' exonuclease 634 793 IPR002562 GO:0003676|GO:0006139|GO:0008408
Dod08g0319 1350 SUPERFAMILY Ribonuclease H-like 569 793 IPR012337 -
Dod08g0319 1350 Pfam DNA polymerase family A 1014 1347 IPR001098 GO:0003677|GO:0003887|GO:0006260
Dod08g0319 1350 PRINTS DNA-polymerase family A (pol I) signature 1122 1135 IPR002298 GO:0003887|GO:0006261
Dod08g0319 1350 PRINTS DNA-polymerase family A (pol I) signature 1047 1069 IPR002298 GO:0003887|GO:0006261
Dod08g0319 1350 PRINTS DNA-polymerase family A (pol I) signature 1092 1115 IPR002298 GO:0003887|GO:0006261
Dod08g0319 1350 PRINTS DNA-polymerase family A (pol I) signature 1293 1306 IPR002298 GO:0003887|GO:0006261
Dod08g0319 1350 PRINTS DNA-polymerase family A (pol I) signature 1263 1279 IPR002298 GO:0003887|GO:0006261
Dod08g0319 1350 PRINTS DNA-polymerase family A (pol I) signature 1070 1085 IPR002298 GO:0003887|GO:0006261
Dod08g0319 1350 CDD DNA_pol_A_plastid_like 944 1347 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g0319 Dod-Chr8 3387385 3399071 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g0319 179 237 Glycoside Hydrolase AT3G07070 59.322 5.74e-12 67.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Dod08g0319 DNA_pol_A 3.7e-73 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g0319 K02335 - gmx:100797016 1687.93